Protein

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Genbank accession
YP_012787138.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSFFAGKYTDGKTVLSLNRASGGDTSIHYSPNTNSIFHSDMPHMFVKRRFQVGLGNAGNGYFTGGLPSDLSYILANRANVVIPILVVRDNADGTEYYHQMTGIQRNSTYRWQNLYQSISIWGQYTGSIQFDLNLEWGYWKQGGAVWDQIGNYGTGGHIIFDHEGGEDYLADAYYDLAGGWVMYQYRDPQDWYMYTNWIPRSQARPIMNYEDSQNLVNPDYMHPLGPSSSVYDAVYVRAGGARCATGMGDPNSYGNTAYTKYRDLDFPYQIPMANSSSAYMTAGAERHVANGRMSGFSEVYYPFTPVRMEYLWLNVTFDNYWGYSAENLFTGSDIKIAKDSFIIKGVDLRNTSYEMLAAVSTGTPSISNTYFSSNVFAWSSTEMDDGGAFRFFGANAWGGLKGFTGSNTGSTVGNSTPWNIGLYRLPQNSNIEINSPQNKIAINGVDIWSPNVRPLQLFPQNKANNIILGDNSRLFPMAYGETRLINTVDVGLGGSPEPSTILLSIEWMGNSLCDTDGDVNMQRIGNNAASGAGSGPYVGAARRLVKYDYDVGDGVSHQIVVLHTNTFVPILTTNTISYAGGAGGAPRNKFQYYIRKNASNILEFWVTSRALPMSGLPVSYTPWVQYHKLRLNIQRLT
Physico‐chemical
properties
protein length:637 AA
molecular weight: 70747,05830 Da
isoelectric point:6,01251
aromaticity:0,13501
hydropathy:-0,34741

Domains

Domains [InterPro]
IPR059609
RBD
1–637
IPR059609
YP_012787138.1
1 637
Architecture
RBD
RBD 1-637
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_012787138.1
1 637
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0152
Central domain 11 452 443 0,8712
C-terminal 453 637 184 0,9485
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-452
C-terminal
453-637

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_UTK0009
[NCBI] 		3028908 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus UTK0009
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012787138.1 [NCBI]
Genbank nucleotide accession
NC_111487 [NCBI]
CDS location
range 110658 -> 112571
strand -
CDS
ATGAGCTTCTTCGCAGGAAAGTATACAGATGGAAAAACAGTCCTATCTCTAAATAGGGCTAGTGGAGGAGACACTAGCATTCATTATAGTCCTAACACTAACTCCATCTTCCATTCAGACATGCCTCACATGTTTGTTAAACGCCGTTTTCAGGTGGGTCTAGGGAACGCCGGTAATGGATACTTTACCGGAGGCCTTCCATCAGATCTTAGCTACATTTTAGCTAATAGGGCTAACGTGGTTATTCCAATCCTAGTAGTACGAGATAATGCTGATGGTACTGAATATTATCATCAGATGACAGGTATCCAGAGAAATAGTACATATAGGTGGCAGAACCTCTATCAGAGTATTAGTATCTGGGGTCAGTATACAGGTTCTATTCAGTTTGACCTAAATCTTGAGTGGGGCTATTGGAAACAGGGTGGTGCTGTTTGGGATCAGATTGGTAACTATGGTACTGGTGGTCATATTATATTTGACCATGAAGGTGGTGAAGACTACCTTGCGGATGCTTACTATGACTTAGCAGGTGGCTGGGTTATGTACCAGTATCGTGATCCGCAGGATTGGTATATGTATACCAACTGGATACCACGTTCTCAAGCTCGTCCTATTATGAACTATGAGGACAGCCAGAACTTAGTAAACCCAGACTACATGCATCCACTTGGACCTTCTAGTAGTGTTTATGATGCTGTTTACGTGCGTGCTGGTGGTGCTAGATGTGCTACTGGTATGGGTGACCCTAACTCTTATGGTAACACAGCGTATACTAAGTATAGGGATCTTGATTTCCCTTATCAGATTCCAATGGCTAACTCTAGTAGTGCGTACATGACTGCTGGTGCTGAACGCCACGTTGCTAATGGGCGTATGTCTGGGTTTAGTGAGGTTTACTATCCGTTTACTCCAGTTCGTATGGAGTATCTGTGGTTGAACGTTACATTTGACAACTACTGGGGTTACTCAGCTGAGAACCTGTTTACCGGTAGTGATATTAAGATTGCAAAAGATTCCTTTATAATTAAAGGTGTTGATCTAAGAAATACTAGCTACGAAATGTTGGCGGCAGTTAGCACCGGGACTCCTAGTATTAGTAACACCTACTTCTCTAGTAACGTGTTTGCTTGGTCATCTACAGAAATGGATGATGGTGGTGCTTTCAGATTCTTTGGTGCTAATGCCTGGGGTGGTTTGAAAGGATTTACAGGAAGTAATACAGGTAGCACAGTAGGTAATTCCACTCCATGGAATATTGGATTATACAGACTTCCCCAGAATAGTAATATCGAGATTAACTCTCCACAGAATAAGATAGCTATTAATGGTGTGGATATCTGGAGTCCTAATGTACGTCCATTGCAATTATTCCCTCAGAATAAAGCTAATAATATTATTCTTGGTGATAATAGTAGGTTATTCCCGATGGCGTATGGAGAAACTAGATTAATAAATACAGTTGATGTGGGATTAGGCGGCAGTCCAGAGCCTTCTACGATTCTCCTAAGTATTGAGTGGATGGGTAATTCTCTATGTGATACTGATGGTGACGTAAACATGCAACGTATTGGTAACAATGCTGCTAGTGGTGCAGGTAGTGGCCCATATGTTGGTGCTGCTAGGCGTTTGGTTAAATACGATTATGATGTAGGTGATGGGGTTTCTCACCAAATCGTAGTGCTACATACAAATACCTTTGTACCTATTCTAACTACCAATACTATTTCATACGCTGGTGGTGCAGGTGGTGCTCCTAGAAATAAATTCCAGTACTATATCAGGAAGAACGCTTCCAATATTCTAGAGTTTTGGGTAACTTCTAGAGCTTTACCGATGAGCGGCCTACCTGTTTCATATACTCCGTGGGTTCAATACCACAAACTAAGACTTAATATTCAGAGGTTAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e942d72387f0ff808c07f4d0eb012698c5faea2c9473c20ad0b182446b818c9d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2401
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a Diverse Collection of Salmonella Phages Isolated from Tennessee Wastewater Bryan,D.W., Hudson,L.K., Wang,J. and Denes,T.G. — — GenBank