Protein

View in Explore
Genbank accession
XQU46450.1 [GenBank]
Protein name
pre-neck appendage protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MFFTDLPINLGQEFRRKSISNFKHLLYQTNRLKVALNEHKTTDKIAHRSDQISHNGSTASEWIKYFNQRLKAQIVGANGDGISELSDSRVSLNGTRFDLLSERLEYDLVNMQNDMTEQYNDVLNIVTRIRNVNDYGGDPTGQKDSTKAFEKAIEDGGQHVHMTAGTYLTTGLKLPSNTVLSGEGKDITILKLTEDTPQENLVVTNRDLDGTAENIVVQNLTIDGNRYRRDGALKPAGGSLSSGLRFAGVTHGYAYNVKTKDTLLHGIDVTYANDEYYYEGDGNRVDKQLESQFIHIDNCETTGFGDDGITTHHSRHLLITNNYSHNPAKNGGNNNGIEIDDGSQFVMLDNNMTRLNYGGIEVKAHATASAASGVFINNHLSIEDTRSYNFRHIGHHRRATDVQSKTAYNITMSNSVALYPYANGVYGLTTPRALVISAFKNVAVSNFTAIGDGRFSAGQPAIALQFMTENVMLNNINIRGFKNALADIKLNGGNNKGKNIKLTNINIIDSSVNIGIAGGAGMSGVGIYNSNIQGTGKGNGIELYNHFAEMVGLTVEGYKNNVVIGPNNYDTPPTVLKGGLSAASTGGGAVDRRAALIASTGESFAYDKNSFVLGSNVKSKAYGTRSGVINSSSSETLKDGFAQTIFNSRSVKSLGNYHFQMGYGDTNTPSASNTKVDISGYSGNIKTAGSIKSGQDIGDLAEFFETANGRKIENGFIVTLNGRYIRKAQLGDEPLGVVSATAGLVMGDQMFYHKGKYLKDEFGVTLTEMGEDTYITDDGEEVTQIIEKPILNKDYDPSLEDAYESRMERDEWATVGLIGQVFTRVDDTVRDGDKISAINGVGTKDNDNGYYRVLEVTTPYEAGKGYGVALVLVK
Physico‐chemical
properties
protein length:874 AA
molecular weight: 95077,46540 Da
isoelectric point:5,76765
aromaticity:0,08124
hydropathy:-0,44153

Domains

Domains [InterPro]
DC_0125
ATT
1–221
DC_0125 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 G3DSA:2.160.10.20 G3DSA:2.40.300.10
IPR012334
STR
114–574
IPR012334 IPR021865
IPR011050
STR
128–478
IPR011050 G3DSA:4.10.80.40
IPR024535
ENZ
129–357
IPR024535 DC_0616
IPR006626
Unmapped
212–248
IPR006626
XQU46450.1
1 874
Architecture
ATT
STR
RBD
ATT 1-221 | STR 222-643 | RBD 644-874
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XQU46450.1
1 874
Domain Start End Length (AA) Confidence
N-terminal 1 144 144 0,9938
Central domain 145 651 508 0,9835
C-terminal 652 874 222 0,9112
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-144
Central
145-651
C-terminal
652-874

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage TPWB-09
[NCBI] 		3388605 Viruses >
Host Staphylococcus sp.
[NCBI] 		29387 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQU46450.1 [NCBI]
Genbank nucleotide accession
PQ358088 [NCBI]
CDS location
range 13680 -> 16304
strand -
CDS
ATGTTTTTTACAGACTTACCTATAAATTTAGGGCAAGAGTTTAGACGCAAGTCAATAAGTAATTTCAAGCATTTACTTTATCAAACGAACAGATTAAAAGTTGCATTGAACGAGCATAAAACTACAGATAAGATCGCTCATAGGTCAGATCAAATAAGTCATAACGGTAGCACAGCGTCGGAATGGATTAAATATTTTAATCAAAGATTAAAAGCTCAAATCGTAGGCGCTAACGGCGACGGCATATCTGAATTGTCTGATAGTCGTGTATCGTTAAATGGAACACGTTTCGACTTGTTATCCGAGCGTTTAGAATATGATCTGGTTAACATGCAAAATGATATGACAGAACAGTATAACGATGTATTGAATATTGTTACAAGAATTAGAAACGTTAACGATTACGGAGGCGATCCAACAGGCCAAAAGGATAGCACAAAAGCCTTTGAAAAGGCTATCGAGGACGGTGGCCAACACGTTCACATGACTGCCGGAACATATTTAACTACAGGGTTGAAGTTACCTAGTAACACAGTTTTAAGTGGGGAAGGTAAAGACATTACTATTCTTAAATTGACAGAAGATACACCACAAGAAAACCTCGTCGTTACTAATAGAGATTTGGACGGCACAGCAGAAAATATTGTCGTGCAGAACTTAACAATTGACGGCAACAGATATAGACGTGACGGCGCTTTGAAACCGGCCGGAGGATCTTTATCGTCTGGCCTAAGATTTGCCGGTGTAACACATGGTTATGCTTATAACGTCAAGACTAAAGACACATTGTTGCATGGTATAGACGTTACTTATGCTAATGATGAATACTACTACGAGGGCGACGGCAATCGTGTAGACAAACAGTTAGAAAGTCAATTTATACACATTGACAATTGTGAAACAACAGGATTTGGCGATGACGGTATCACAACACACCACTCACGCCACTTATTAATTACAAATAACTATTCACACAACCCGGCTAAAAACGGTGGTAATAACAACGGTATTGAAATAGACGACGGATCACAATTCGTTATGTTAGATAACAACATGACACGTTTAAACTATGGAGGTATCGAAGTTAAAGCACACGCAACAGCAAGTGCAGCATCTGGCGTATTCATCAATAACCATTTATCTATTGAAGATACACGTAGTTATAACTTTAGACATATTGGCCACCATAGACGTGCTACAGACGTTCAAAGTAAAACAGCCTACAACATTACTATGAGTAATTCGGTAGCCTTATATCCATATGCAAATGGTGTGTACGGATTGACAACGCCTAGAGCGTTAGTTATCAGTGCATTTAAAAACGTTGCAGTAAGTAACTTCACAGCTATTGGCGACGGTCGTTTTAGCGCCGGACAACCGGCTATCGCATTACAATTCATGACTGAAAATGTGATGTTGAACAATATCAACATTAGAGGTTTCAAAAATGCTTTAGCTGATATCAAACTTAATGGTGGTAATAACAAAGGTAAAAACATTAAGTTAACTAATATCAATATCATAGACTCGTCAGTTAATATTGGTATTGCCGGTGGTGCCGGTATGAGTGGCGTTGGTATTTATAATTCAAATATTCAAGGTACTGGAAAAGGTAACGGAATAGAATTATATAACCACTTTGCAGAAATGGTTGGCCTCACTGTAGAAGGTTACAAGAACAATGTAGTGATTGGCCCTAACAATTACGACACACCACCAACAGTATTAAAAGGTGGATTGAGTGCAGCGTCTACTGGTGGAGGCGCAGTAGATAGGAGAGCAGCGTTAATTGCGTCTACCGGCGAGTCGTTCGCTTATGACAAGAACTCATTTGTATTAGGTTCTAACGTTAAAAGTAAAGCATATGGTACACGTTCTGGCGTTATCAATTCTTCATCAAGTGAAACGTTGAAAGACGGTTTCGCCCAAACGATTTTCAACTCACGTTCTGTTAAGTCATTAGGTAACTACCATTTCCAAATGGGATATGGCGACACTAATACGCCAAGCGCAAGCAATACTAAAGTTGATATATCCGGTTACAGTGGTAATATCAAAACGGCCGGATCAATCAAATCTGGTCAAGATATTGGCGACCTTGCAGAATTTTTTGAAACAGCTAACGGTCGTAAAATCGAAAATGGTTTCATTGTTACATTGAACGGTCGTTATATTCGTAAGGCTCAATTAGGCGACGAGCCATTGGGCGTTGTTTCAGCTACGGCCGGTTTAGTAATGGGCGACCAAATGTTTTATCACAAAGGCAAATACTTAAAAGATGAATTCGGTGTGACGCTTACAGAAATGGGAGAGGATACTTATATCACTGATGACGGCGAAGAAGTAACACAAATCATTGAGAAACCAATCCTAAATAAAGACTATGATCCAAGTTTAGAGGACGCTTACGAGTCAAGAATGGAGCGTGACGAATGGGCGACAGTCGGATTGATCGGTCAAGTATTCACTCGTGTTGATGACACAGTAAGGGACGGCGACAAGATAAGCGCTATAAATGGTGTTGGGACTAAAGATAATGACAACGGCTATTATCGTGTATTGGAAGTTACGACACCATACGAGGCCGGCAAAGGTTACGGCGTAGCATTAGTGTTAGTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6505a415f6d9937c3388dd585f0fbba7ef26f42563ec168c24941666116dc25a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3061
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50