Protein

View in Explore
Genbank accession
QKW95410.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAIKLSNNAVSHLAAELAQGDTQIILTPGEGSMFPTLGAGDYFQATLAKASGQYEIVRATVRDVDTLTVLRGQENTQALHFAAGDRIELRVTAGVLNALADAVRQIRPKLGDIKMWSGAVANIAAVHGPGWQLADGTNGTIDLRDRFIVGAGASYAPGNTGGANTVAISAEQMPQHNHGVNDPGHNHGVNDPTHAHSVYDPGHSHGHNTAALTPSSTGGGAFQINGYAGGTINASATGIGIYGAATGISIQGASTGGGAFQINGYAGGTINASATGIGIYGAATGISIQGAGTGISTQNSGSGAAHENRPPYFALAFIQYTGAGVIEI
Physico‐chemical
properties
protein length:328 AA
molecular weight: 33021,06410 Da
isoelectric point:5,95607
aromaticity:0,06098
hydropathy:-0,04329

Domains

Domains [InterPro]
DC_0891
STR
1–257
DC_0891
cd22641
STR
89–187
cd22641 DC_0891
SSF88874
STR
108–318
SSF88874
QKW95410.1
1 328
Architecture
STR
STR 1-327 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QKW95410.1
1 328
Domain Start End Length (AA) Confidence
N-terminal 1 199 199 0,7492
Central domain 200 317 119 0,4745
C-terminal 318 328 10 0,9974
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-199
Central
200-317
C-terminal
318-328

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RPZH6
[NCBI] 		2736195 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ralstonia pseudosolanacearum
[NCBI] 		1310165 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKW95410.1 [NCBI]
Genbank nucleotide accession
MT361768.1 [NCBI]
CDS location
range 55991 -> 56977
strand -
CDS
ATGGCTATCAAGCTGTCCAACAATGCAGTGTCCCATCTTGCCGCCGAGCTGGCGCAGGGCGACACCCAAATCATCCTGACGCCGGGCGAGGGCAGCATGTTCCCGACACTCGGCGCCGGAGACTACTTCCAGGCCACGCTCGCGAAAGCATCCGGCCAATACGAGATCGTGCGCGCCACTGTGCGCGATGTCGACACGCTGACCGTGCTGCGAGGGCAGGAGAACACCCAGGCGCTGCACTTCGCAGCCGGCGATCGTATCGAGCTGCGCGTCACGGCGGGGGTGTTGAATGCGCTCGCCGACGCGGTGCGCCAGATTCGTCCCAAGCTGGGAGACATCAAGATGTGGAGCGGCGCAGTCGCCAACATAGCCGCCGTGCATGGGCCTGGATGGCAGCTTGCCGATGGGACGAATGGGACCATTGATCTACGGGACCGGTTCATCGTCGGGGCGGGTGCATCCTATGCGCCTGGGAACACCGGCGGAGCCAACACCGTCGCTATTTCCGCAGAGCAGATGCCGCAGCATAATCACGGGGTCAATGACCCCGGCCACAATCACGGCGTCAACGATCCGACGCACGCGCATAGCGTCTACGACCCTGGACACTCGCACGGCCACAACACGGCGGCGCTGACTCCATCGAGCACGGGCGGCGGCGCGTTCCAGATCAACGGCTATGCTGGCGGCACGATCAACGCTTCCGCCACGGGGATCGGCATCTACGGGGCTGCTACGGGCATCAGCATTCAGGGCGCGAGCACGGGCGGCGGCGCGTTCCAGATCAACGGCTATGCTGGCGGCACGATCAACGCTTCCGCCACGGGGATCGGCATCTACGGGGCTGCTACGGGCATCAGCATTCAGGGCGCGGGGACTGGCATCAGCACGCAAAATTCCGGCAGCGGCGCCGCACACGAGAACCGACCGCCGTATTTCGCGCTGGCGTTCATCCAGTACACTGGCGCTGGTGTGATTGAAATCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
1318e18f047e4e323b6a845c35b26b206596899b22d5a9f689a5c7bc120e04fd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7359
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of bacteriophage RPZH6 Lin,Z.J., Chen,C.J., Hu,F.P. and Cai,X.Q. 2022-02-17 — GenBank