Protein

View in Explore
Genbank accession
WID30625.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,73
Protein sequence
MGLEVATYINQLVPTNPTGSDLKSFGDDHLRLIKSAIKNTFPNISQAVTVTAAQLNAVADTTQYVKPGMVIMWAGSLAQIPAGWKLCNGVGTTSNGIPVPNLIGAFPWGINGSSQAVGTRGGSANIVWDGFTEGTALTLAQIPSHTHTWRTRGATTLTGSAGDSGALTGGSGNAANTNLETGPAGQGQTHNHAVKINMPLGNIPPFCSVFFIIKN
Physico‐chemical
properties
protein length:215 AA
molecular weight: 22167,77100 Da
isoelectric point:8,66489
aromaticity:0,06512
hydropathy:0,00000

Domains

Domains [InterPro]
DC_2164
STR
3–215
DC_2164
SSF88874
STR
60–214
SSF88874
WID30625.1
1 215
Architecture
STR
STR 3-215
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage HMGUpa2
[NCBI] 		3028474 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa DSM 50071
[NCBI] 		1123015 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas aeruginosa

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WID30625.1 [NCBI]
Genbank nucleotide accession
OQ338181.1 [NCBI]
CDS location
range 35541 -> 36188
strand -
CDS
ATGGGTCTTGAGGTCGCAACTTATATTAACCAGTTGGTGCCTACGAACCCTACCGGCTCTGATCTGAAGTCCTTTGGGGATGACCACCTGCGACTCATTAAGAGTGCTATTAAGAATACCTTCCCCAATATTTCTCAGGCTGTCACTGTAACGGCAGCCCAGCTAAACGCAGTCGCTGATACAACCCAGTATGTTAAACCTGGGATGGTTATCATGTGGGCTGGGTCACTGGCTCAGATCCCAGCAGGTTGGAAGCTTTGTAATGGTGTAGGGACTACCTCTAATGGTATCCCAGTCCCCAACCTCATTGGTGCATTCCCCTGGGGTATCAACGGATCTTCCCAGGCTGTAGGTACTAGAGGCGGTAGCGCTAACATTGTATGGGATGGGTTCACTGAAGGGACTGCCCTTACCCTAGCCCAAATCCCATCACACACCCACACTTGGAGAACTAGGGGTGCTACTACCCTCACCGGTTCTGCGGGTGACTCAGGTGCTCTGACGGGAGGTTCTGGTAACGCAGCCAATACCAACCTTGAGACTGGCCCTGCTGGTCAAGGTCAGACTCACAACCATGCAGTAAAGATCAACATGCCGTTGGGTAATATCCCACCGTTCTGTTCTGTGTTCTTCATCATTAAGAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c7c81b309d536d83e5237d11b702cd181297a4296f95c148436d23c18bd4570c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7408
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Metagenomic analyses of single phages and phage cocktails reveal contamination with temperate phages and bacterial DNA Peng,X. 2024-09-12 — GenBank