Protein

View in Explore
Genbank accession
QDJ97605.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MVIKYDIGSNEIVLHLREGKYITGFTTVGGYDKEIGQVKVNREILPAYFFDNFAYERYLYYSRPEEVIENKDYVPPQNNSFEVESQQNTVPKEQYDNLKEELELMKKQQEAMMKMLQQLLGQKGQ
Physico‐chemical
properties
protein length:125 AA
molecular weight: 14771,56580 Da
isoelectric point:4,96394
aromaticity:0,12000
hydropathy:-0,75680

Domains

Domains [InterPro]
DC_0295
STR
4–124
DC_0295
IPR021358
STR
18–77
IPR021358 Coil
QDJ97605.1
1 125
Architecture
STR
STR 4-124 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PALS_1
[NCBI] 		2591343 No lineage information
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDJ97605.1 [NCBI]
Genbank nucleotide accession
MN091625.1 [NCBI]
CDS location
range 112334 -> 112711
strand -
CDS
ATGGTTATTAAATACGATATAGGAAGTAATGAGATAGTATTGCATTTAAGAGAAGGTAAATATATCACAGGATTTACAACAGTAGGTGGATATGATAAGGAGATAGGACAAGTAAAAGTTAATAGAGAAATTTTACCTGCTTATTTCTTTGATAATTTTGCTTATGAAAGATACTTGTATTATAGTAGACCTGAAGAGGTCATAGAGAATAAAGATTATGTACCACCTCAGAACAATAGTTTTGAGGTAGAATCCCAACAAAATACTGTACCTAAAGAACAGTATGATAATTTAAAAGAAGAGCTAGAACTTATGAAAAAACAACAGGAAGCTATGATGAAAATGCTTCAACAACTCTTAGGTCAAAAGGGGCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fee17372ba9c218b3b9b85f0fd3c3307208e0478ef21ff10ecd9645cf7e8b7d5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8623
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Staphylococcus aureus phage PALS_1 Lee,Y. and Ryu,S. 2020-04-16 — GenBank