Protein

View in Explore
Genbank accession
YP_009846885.1 [GenBank]
Protein name
endo-N-acetylneuraminidase domain protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSVKAWEKYQPNASSPSPQYPYGSLRQETTLGMGDGTPLDVEWGNDFEAFKQTAFSRSGLVPSGNTDTVTNSEMFNAMQDSTTRTLWERSAAESGYNLVAGSFEDGGTLVNDNDTLWSKKLNKIFSGAAGNVIAGTDPTGGGFVDRSGELLRNELFATVSSVSAGGYGVGAKLTITDRDNARFNVVAGGIPNGIDILNAGTGKTATLVIAGNELNASWLGFKLSNPDNAPILQRAVDIAHTLKYPVIMPPGNAPFNCSRVTVYQDTVLRGAGEYLTELKAPNSASTGSDIIRSENADSLFGTSSEEGAHNLELSDFALNGNRQRPGNSSGITSGTCLKYYGRTNKFKNLRIYHSADDGMRTEWGAGVALAEGLEGRFSSITIGYSGGNGWRFGGPHDSHCDDIIIHTSGQKATNTYKNLLVEKGNATYILFSTQTRVRQAKPVGYRMLCTSRAAVALMVMNS
Physico‐chemical
properties
protein length:462 AA
molecular weight: 49335,23750 Da
isoelectric point:5,94328
aromaticity:0,08442
hydropathy:-0,35887

Domains

Domains [InterPro]
DC_0226
STR
1–461
DC_0226
IPR012334
STR
226–435
IPR012334
IPR011050
STR
227–406
IPR011050
YP_009846885.1
1 462
Architecture
STR
STR 1-461 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009846885.1
1 462
Domain Start End Length (AA) Confidence
N-terminal 1 227 227 0,9933
Central domain 228 429 203 0,9935
C-terminal 430 462 32 0,9548
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-227
Central
228-429
C-terminal
430-462

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage 4L372XY
[NCBI] 		2588520 Uroviricota > Caudoviricetes > Plateaulakevirus >
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009846885.1 [NCBI]
Genbank nucleotide accession
NC_048772 [NCBI]
CDS location
range 44350 -> 45738
strand -
CDS
ATGTCAGTAAAAGCATGGGAAAAATATCAACCTAACGCATCCTCACCTTCTCCTCAATATCCTTATGGTAGCTTGAGGCAAGAGACTACATTGGGAATGGGTGATGGTACACCCTTAGATGTTGAGTGGGGCAATGATTTTGAAGCATTTAAACAAACAGCTTTTTCACGGTCAGGTTTAGTCCCATCAGGAAATACCGATACTGTTACAAATAGTGAAATGTTTAATGCAATGCAAGATAGCACTACCAGAACTCTTTGGGAAAGATCTGCTGCCGAATCAGGCTATAATCTCGTAGCGGGCAGTTTCGAAGATGGTGGTACACTAGTTAACGATAATGATACCTTGTGGAGCAAAAAGTTAAATAAGATCTTCTCCGGAGCTGCTGGGAATGTTATTGCTGGGACAGACCCGACTGGCGGTGGTTTTGTTGACAGGAGCGGTGAACTGTTGCGAAATGAACTTTTTGCTACTGTTTCCTCGGTGTCTGCTGGGGGATACGGTGTCGGAGCCAAACTAACAATCACAGACCGTGATAATGCCCGCTTTAATGTTGTGGCCGGAGGCATTCCGAACGGCATTGATATCCTAAATGCTGGAACTGGAAAAACGGCAACTCTGGTGATTGCAGGTAATGAGTTAAATGCCTCATGGCTCGGGTTTAAACTGTCCAACCCAGATAACGCCCCTATCTTGCAACGCGCGGTGGATATCGCACACACGCTGAAATACCCAGTTATAATGCCACCCGGTAATGCACCATTTAATTGCTCACGAGTAACCGTGTACCAAGATACAGTATTGCGGGGTGCTGGTGAGTACCTAACAGAGCTCAAAGCGCCAAATAGCGCATCTACTGGGTCTGATATAATTCGCTCGGAAAACGCCGACTCGCTATTTGGAACTAGTAGTGAGGAAGGCGCGCATAATCTAGAATTGTCTGATTTTGCACTGAACGGAAACCGCCAACGCCCAGGTAATTCCAGCGGGATAACATCAGGAACATGTCTCAAATACTATGGGCGCACGAATAAATTCAAAAACCTGCGAATTTATCACTCTGCTGATGATGGTATGCGCACTGAGTGGGGCGCAGGAGTCGCTTTGGCAGAAGGGCTTGAGGGTAGGTTTAGTTCGATCACCATCGGGTATAGCGGTGGTAATGGCTGGCGCTTTGGCGGACCGCATGATTCTCATTGCGACGACATCATCATCCACACGAGTGGGCAAAAGGCCACAAACACTTACAAAAACCTCTTGGTCGAGAAGGGTAATGCTACGTATATTCTCTTTTCTACACAGACCAGGGTGCGCCAAGCCAAGCCAGTAGGGTATCGCATGCTCTGTACATCGCGGGCGGCGGTGGCGCTGATGGTAATGAATTCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
9a1c2d6b5e46477ab598241c65e5ea272efee065b91d92e54db432f51540ebbd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7973
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Nine Novel Phages from a Plateau Lake in Southwest China Provide Insights into Aeromonas Phage Diversity Xiao,W., Bai,M., Wang,Y. and Cui,X. 2019-07-05 — GenBank