Protein

View in Explore
Genbank accession
AND75512.1 [GenBank]
Protein name
baseplate protein
RBP type
TSP
Evidence DepoScope
Probability 0,95
Protein sequence
MFVDEFSSVYECLLYCYKFAKHSEELQGRRVFPILSVVTNNKDPEERRRIKIADPLFGNLVESGWIRPIRVSQNQDNPLPQINQMVIVWFVDGDSEKGFYLPVINDTNPSRDKQDSVNDSAIRIEGNNSLKVDGNDSGEIGGNQTLAIAGEQNINVDGNMIENIGGDIDQNVDGKIEVRSESTILIDADGTIIIKNDSGAFISLGGNGEVLIQDSAGRKIRLGGGFNSTWDLNNLPMSFINATSVTIAGKEIATVGAVDNDGDTIVNKGW
Physico‐chemical
properties
protein length:270 AA
molecular weight: 29494,50800 Da
isoelectric point:4,44586
aromaticity:0,06667
hydropathy:-0,31741

Domains

Domains [InterPro]
DC_1119
STR
1–270
DC_1119
IPR006531
STR
36–103
IPR006531 SSF69349
AND75512.1
1 270
Architecture
STR
STR 1-270
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AND75512.1
1 270
Domain Start End Length (AA) Confidence
N-terminal 1 171 171 0,8896
Central domain 172 259 89 0,1830
C-terminal 260 270 10 0,9815
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-171
Central
172-259
C-terminal
260-270

Taxonomy

  Name Taxonomy ID Lineage
Phage Nostoc phage N1
[NCBI] 		1775255 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Nostoc sp.
[NCBI] 		1180 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AND75512.1 [NCBI]
Genbank nucleotide accession
KU234532 [NCBI]
CDS location
range 20503 -> 21315
strand +
CDS
ATGTTTGTAGATGAATTTTCAAGCGTTTATGAATGCTTACTATATTGTTACAAGTTTGCAAAGCATTCTGAAGAGTTGCAAGGTAGGAGAGTATTCCCTATACTCTCTGTCGTAACGAATAACAAAGACCCTGAAGAACGTAGGCGCATTAAAATCGCTGATCCTCTCTTTGGTAATCTTGTAGAATCAGGCTGGATAAGACCCATCAGAGTTAGTCAAAACCAAGATAATCCGCTACCACAAATTAACCAGATGGTTATCGTCTGGTTTGTTGATGGTGATTCTGAAAAAGGTTTTTATTTACCAGTAATCAATGATACAAACCCTTCTAGAGATAAACAGGATTCTGTTAATGATTCTGCAATCCGAATAGAAGGTAATAACAGCTTAAAAGTTGATGGTAATGATTCCGGGGAAATTGGGGGTAATCAGACCCTAGCGATCGCTGGCGAACAGAATATCAATGTCGATGGTAACATGATCGAAAATATTGGCGGCGATATTGATCAGAATGTCGATGGCAAAATAGAGGTTAGAAGCGAATCTACAATACTTATCGATGCTGATGGTACAATCATCATTAAAAATGATTCGGGTGCTTTTATCAGCCTTGGAGGTAACGGTGAAGTGCTGATACAAGATTCCGCAGGACGTAAAATTCGATTAGGCGGTGGCTTTAACTCCACATGGGATTTGAATAACTTACCAATGAGTTTCATCAATGCAACATCGGTCACAATTGCTGGTAAAGAAATTGCGACCGTCGGCGCAGTTGATAACGACGGCGACACTATTGTAAATAAAGGGTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5aea4108362554408b0723f45e80da1982603ca7d6bd1fbb4d8769e32865472e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7604
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50