Protein

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Genbank accession
YP_009808037.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MATVKKLGALAADIQSLMPDNNEGFIVPASARELYDNIMVSVIDAKGVLDMTLNTQSQDLSATAVPVLNWTANYKDAGMDFNAANGTVVGYAQAGWWHEFNFVCTIVGTQNRLVTAQLYINDQPTVVETTLRLEGLSNAQVIQLDALPMVTGAADTFSVKLTADQPTTVLIPRGFMQIVRKPTQ
Physico‐chemical
properties
protein length:184 AA
molecular weight: 19906,51720 Da
isoelectric point:4,56829
aromaticity:0,07065
hydropathy:0,10543

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaP_KF1
[NCBI] 		2041472 Uroviricota > Caudoviricetes > Autographivirales > Maculvirus > Maculvirus KF1
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009808037.1 [NCBI]
Genbank nucleotide accession
NC_048035.1 [NCBI]
CDS location
range 24464 -> 25018
strand +
CDS
ATGGCTACGGTCAAGAAATTAGGTGCACTAGCGGCTGATATTCAGTCGTTAATGCCTGACAACAACGAGGGCTTCATCGTGCCAGCTTCGGCACGTGAGCTTTATGACAACATCATGGTCAGTGTTATTGACGCCAAGGGCGTACTGGACATGACTCTGAACACACAATCGCAAGACCTGAGTGCAACTGCCGTGCCTGTGTTGAACTGGACAGCGAACTACAAAGATGCTGGCATGGATTTCAATGCGGCTAACGGTACTGTGGTTGGCTACGCACAAGCTGGCTGGTGGCACGAGTTCAACTTCGTATGTACGATTGTGGGCACTCAGAACCGCCTAGTAACGGCACAACTGTACATCAATGACCAACCTACTGTGGTTGAGACAACTCTACGCTTAGAGGGTCTGTCGAACGCTCAGGTTATCCAGTTGGATGCGTTGCCTATGGTGACTGGCGCTGCTGATACGTTCAGTGTGAAGTTAACCGCTGACCAACCAACTACTGTGCTAATCCCTCGTGGGTTCATGCAGATTGTTCGGAAACCAACTCAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
80f69c509eccc67adebb7ee132e92c5691a4e68e5a789fd71dcf6470582fd7fc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7971
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage vB_VpaP_KF1 Yu,J., Kwak,S.-J., Lim,J.-A. and Chang,H.-J. 2005-02 — GenBank