Protein

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UniProt accession
A0A649VKW3 [UniProt]
Protein name
Trimeric autotransporter adhesin YadA-like stalk domain-containing protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MGAIRYGTRINLQHNQILNAIIHHKTGLDETPTAALRGAIRFNTGDGRLYICDGTAWNLKATNSDALQGLSPAQLRDRSTHTGQQPASTISDLRTVVGGYPLNEHAAPTAAVAMGSQKITGLADGTASTDAVNKSQLDAIAAMAANGIAIKQPVLAVATGNISLTTITTIDGVTIPTNGRFLLAGQTDATQNGIYIKNASNAAVRATDADAAGELAPGTQVFVTGGTVNADTAWAIVSDATITPGTDAQTWTKVPGQTGSSYTWGNGLLNTSNTISVKPGIGITVSDGSVNVDTSVVVRKNAQAVPSGQGTVVTISHGLNTADILAVQVRDTSGAANTGDLVECGATVTGVNTIQLEFDIAPTTNQYRVAVAG
Physico‐chemical
properties
protein length:373 AA
molecular weight: 38085,98210 Da
isoelectric point:5,62737
aromaticity:0,03753
hydropathy:-0,01448

Domains

Domains [InterPro]
DC_1609
STR
4–373
DC_1609
IPR011049
STR
29–173
IPR011049
IPR011049
STR
58–140
IPR011049
IPR008635
RBD
118–148
IPR008635
A0A649VKW3
1 373
Architecture
STR
STR 4-373
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A649VKW3
1 373
Domain Start End Length (AA) Confidence
N-terminal 1 293 293 0,9507
Central domain 294 362 70 0,0054
C-terminal 363 373 10 0,9970
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-293
Central
294-362
C-terminal
363-373

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Chidiebere
[NCBI] 		2656530 Uroviricota > Caudoviricetes > Chidieberevirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGJ93007.1 [NCBI]
Genbank nucleotide accession
MN586022 [NCBI]
CDS location
range 84762 -> 85883
strand +
CDS
ATGGGTGCCATTCGGTACGGGACACGGATCAACCTTCAGCACAACCAGATACTCAACGCGATCATCCATCACAAGACCGGCTTGGACGAGACCCCGACGGCTGCGTTGCGCGGAGCGATCCGGTTCAACACGGGTGACGGTCGCCTCTACATCTGCGATGGCACCGCGTGGAACCTGAAGGCCACCAACTCGGATGCGCTTCAGGGTCTCTCCCCGGCACAGCTTCGGGATCGTTCCACTCACACCGGACAGCAGCCCGCGTCCACCATCTCCGACCTCCGCACGGTTGTCGGTGGGTACCCGCTCAACGAGCACGCAGCGCCGACGGCAGCAGTGGCCATGGGCAGCCAGAAGATCACCGGCCTCGCAGACGGCACGGCGTCCACCGACGCGGTGAACAAGTCTCAGCTCGATGCCATCGCGGCAATGGCGGCAAACGGCATCGCGATCAAACAGCCGGTCCTCGCCGTGGCCACCGGCAACATCTCGCTGACGACCATCACCACGATCGACGGCGTGACCATCCCGACCAACGGTCGCTTCCTCCTGGCCGGACAGACCGATGCCACCCAGAACGGCATCTACATCAAGAACGCCTCGAACGCCGCCGTGCGGGCCACCGATGCGGATGCAGCCGGTGAACTCGCGCCGGGCACTCAGGTCTTCGTGACCGGAGGTACGGTCAACGCCGACACCGCGTGGGCCATCGTCAGCGACGCCACGATCACTCCCGGAACCGATGCACAGACGTGGACGAAGGTCCCAGGGCAGACCGGCTCGTCCTACACGTGGGGCAACGGTTTGCTGAACACCAGCAACACGATCTCCGTGAAGCCGGGAATCGGCATCACCGTCAGCGATGGCAGCGTCAACGTCGACACCTCTGTGGTGGTGCGGAAGAACGCACAGGCCGTCCCCTCGGGGCAGGGCACTGTCGTCACCATCTCCCATGGGCTCAACACCGCCGACATCCTGGCGGTGCAGGTGCGCGATACCTCGGGTGCGGCGAACACCGGTGATCTGGTGGAGTGCGGCGCGACGGTCACCGGCGTCAACACGATCCAATTGGAGTTCGACATCGCACCGACCACGAACCAGTACCGAGTTGCAGTAGCGGGCTGA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0019867 outer membrane Cellular Component IEA:InterPro (UniProt)

Tertiary structure

PDB ID
5ac98ce76a2f5a37975c26fa383e799a7a6a83b980efaf0f21030c5c366c8289
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8083
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50