Protein

View in Explore
Genbank accession
UYD60086.1 [GenBank]
Protein name
long-tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,54
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADLKLGSQIGGNLIWHQGILELNPLDDSLFYKEFDLISSKGGQTINGAMSLKGIVDTTAQVIAAGVDTAWQGGSANAAFQQQIDNTSGAHWLLASRRKNGSARAGIQVLTNDAGNFRIYTNNLANYTDFGGGQVSIQATTPSSAAHATRKDYVDKEVDRAMQFAETTTDKLTADLATANTRINTLDAQNVKITGNQNIAGTKTFTDLPVIQDQPTADTHAANKKYVDTKVGTAVQSIATTAPLTTTGGVTPTLAITAATRTAAGSMSTSDKVKLDDLPADALSRSGGNMKNNGIIKLEGVGGINSLYNSKEYSIFRDHNNGNVTLSAASGDLYLGYNTTSEVYTTKNVVLHQAMKWNAGNGRVLVDTDGFIPWASIKDRVGLEGKSKMLRGPINFDEYESSGFYNLYLARATGSVNPPPFDYGTMIVTGADKDGNTFVTQIATNKVNGTSYTRTRNDGKMEWGPWRKSLDTGDGAAKRTMERLGYQADAKPMLILFAPRYKDKALSKRGFVGRITFERGSTVSNLQANYIDISAVSAYTQQDVEIHYASSYANSKLVYHTHTDGVEYIALYRGTASSNYVYIDGYVYGEDPILISDATGLTVTDIVTREKIYSSGNKPTNDDLNLVSRAGDEMTGSLTIKNNAPQIHFVETDNGDKRWSFAADGKTFRIHENTTGITEPDMVLRANENGNTEIRKPVSTTPQVNLPNALVRKDYADAIDAKNVAKAGDTMNGTLVAASIKNAIQVNNKGSISMQDGAGTRYHMFVDGNLLRINHGNNGETSIFSLNQLGGVSALGTVNAKQFTSNDDAGFVSARNASQGMFVGADGRTIIGGGTNTTDQASVQIRPGGIGNMSNITSFQADGKVIGKWFVGNTVGVDSNGRQLAMEISAGTDKLPYISVDYAYRALEFNNNKTVTAVHGFEINSRNGLSQYYVRPSGFVGGWARGLALVTGTDPSVIAGGVGFYGGGDKPESVYLGMGGSPWAVDQGIQINTNNQMSLKAGQSGAAIFDAGASAMFRNDNSKAWYHISKIAPDSGIVISHGQTPDMSRAIAGFGANNIDLNPKTYVNSGQFQIRTGGNPVLEFHVPGKHGRIMWVDHTTGDLNIGTSNGAFGEAARIATINTSTIKLNGATWSNAYGHAYAAQYTTIAPFHVDYGAIPGASDYYPLVRSRGYATGAGYTTDVDLGVLRQGNTWGQGVIRVGSAEAGTANTQAIYYFDISGNFKAPAGVYDSGNRVYSASNPPPAGGHNHLNIRARGAVTLWSGDLNAGNFALNQPWTNFDMILFVAAWDNNECFTSKTFTRYDLEYMQAIGVNYDISGGAGGIEWYGRFAGDNQTFVTYKENSRMRFVIGYNLQTVN
Physico‐chemical
properties
protein length:1358 AA
molecular weight: 145484,81270 Da
isoelectric point:6,47165
aromaticity:0,09131
hydropathy:-0,34109

Domains

Domains [InterPro]
DC_0505
ATT
1–129
DC_0505 G3DSA:6.10.140.2190 cd19958 DC_0339
DC_0505
ATT
94–580
DC_0505
UYD60086.1
1 1358
Architecture
ATT
STR
ATT 1-580 | STR 671-1288 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYD60086.1
1 1358
Domain Start End Length (AA) Confidence
N-terminal 1 788 788 0,1707
Central domain 789 993 206 0,5342
C-terminal 994 1358 364 0,8623
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-788
Central
789-993
C-terminal
994-1358

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage avDM12-TAAL
[NCBI] 		3101605 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD60086.1 [NCBI]
Genbank nucleotide accession
OP380604.1 [NCBI]
CDS location
range 53171 -> 57247
strand -
CDS
ATGGCAGATCTGAAATTAGGATCTCAGATTGGCGGAAATCTAATCTGGCACCAAGGCATTCTTGAGCTAAACCCTCTTGATGATAGCCTATTTTATAAAGAGTTCGATTTGATTAGCTCGAAAGGCGGTCAAACTATTAATGGCGCGATGTCATTAAAAGGAATAGTAGATACGACGGCACAAGTTATCGCCGCTGGTGTTGATACTGCATGGCAAGGCGGGAGCGCAAACGCAGCTTTCCAACAACAGATTGATAATACATCTGGCGCACACTGGCTGCTTGCAAGTCGTCGTAAAAACGGAAGTGCTCGCGCTGGTATTCAAGTTCTAACTAACGACGCCGGTAACTTCCGAATTTACACAAACAACTTGGCAAACTATACCGATTTCGGTGGAGGTCAAGTTAGTATTCAAGCAACAACACCATCTTCCGCTGCACACGCAACTCGTAAAGATTACGTGGACAAAGAAGTTGATCGCGCAATGCAATTTGCGGAAACAACGACTGATAAATTGACTGCGGATTTGGCTACTGCTAATACCAGAATCAATACACTAGACGCGCAAAACGTAAAGATCACTGGAAATCAGAATATCGCTGGAACTAAGACTTTCACCGATTTGCCTGTCATTCAAGATCAACCGACTGCCGACACACACGCAGCGAACAAGAAATACGTCGATACCAAAGTTGGTACCGCTGTCCAAAGCATTGCGACAACTGCCCCACTTACTACTACAGGTGGTGTGACTCCAACGCTGGCAATCACGGCTGCCACTCGTACCGCAGCGGGTTCAATGAGTACGAGCGATAAAGTTAAGCTTGATGATTTACCAGCCGACGCATTGAGTCGAAGCGGTGGCAACATGAAGAACAACGGTATTATCAAACTGGAAGGCGTTGGCGGTATTAACTCTCTCTATAACAGCAAAGAGTATTCGATTTTTAGAGATCACAATAACGGCAACGTTACATTAAGTGCCGCTAGTGGTGATTTGTATTTGGGTTATAATACTACATCGGAAGTATATACTACCAAAAACGTTGTTCTACATCAAGCAATGAAGTGGAATGCTGGTAACGGTAGAGTTCTTGTTGATACCGACGGATTTATTCCATGGGCTAGTATTAAAGATCGAGTTGGTCTTGAAGGCAAGTCTAAAATGCTGAGGGGTCCTATTAACTTTGACGAATATGAGAGTTCTGGCTTTTATAACTTATATCTAGCAAGGGCTACTGGGTCCGTTAATCCTCCTCCCTTTGATTACGGCACAATGATTGTTACTGGTGCAGATAAAGACGGAAATACTTTTGTAACTCAGATTGCAACAAACAAAGTAAACGGAACATCTTACACAAGAACTCGTAATGACGGTAAAATGGAATGGGGTCCTTGGAGAAAATCGTTAGATACCGGAGACGGGGCCGCTAAACGTACTATGGAGCGTCTTGGATATCAGGCAGACGCTAAGCCTATGTTAATTCTGTTTGCTCCCAGATATAAAGATAAGGCATTGTCAAAACGTGGATTCGTTGGCCGTATTACATTTGAACGAGGTTCAACCGTTTCTAATCTACAAGCCAACTATATCGATATTTCGGCAGTTAGTGCTTATACACAACAGGACGTTGAGATTCATTACGCTAGTTCCTATGCAAATTCAAAACTTGTTTATCACACTCATACAGACGGTGTTGAATATATTGCATTGTATAGAGGAACAGCAAGCTCGAACTATGTTTATATTGACGGATATGTTTACGGCGAAGATCCTATTCTGATTAGCGACGCAACAGGATTAACTGTTACCGATATCGTCACAAGAGAAAAGATCTATAGTTCTGGCAATAAGCCAACTAATGACGATCTGAATCTCGTAAGTCGCGCCGGAGACGAAATGACAGGGTCGTTGACTATTAAAAACAACGCACCCCAGATTCATTTCGTTGAAACTGATAACGGAGATAAGCGTTGGAGTTTTGCCGCTGACGGTAAAACATTCCGAATTCACGAAAATACAACTGGTATTACCGAACCGGACATGGTGTTAAGAGCGAACGAAAACGGAAATACTGAAATTCGTAAACCGGTATCAACAACACCGCAAGTTAATTTGCCAAATGCCCTTGTTCGTAAAGACTATGCCGATGCAATCGACGCAAAGAACGTTGCTAAAGCAGGGGATACAATGAACGGAACTCTTGTTGCTGCTAGTATCAAAAATGCTATTCAGGTAAACAACAAAGGCTCTATCAGTATGCAAGATGGCGCTGGTACCCGTTATCATATGTTCGTTGACGGTAACTTATTGAGAATAAACCATGGCAACAACGGCGAAACATCAATCTTTAGTTTGAATCAACTTGGCGGAGTATCTGCACTTGGAACAGTAAACGCTAAACAGTTTACATCAAACGACGACGCTGGATTTGTTTCTGCGAGAAATGCTAGTCAGGGTATGTTTGTTGGTGCAGACGGTAGAACTATTATCGGCGGTGGTACCAATACAACAGATCAAGCTTCGGTTCAAATACGTCCGGGAGGCATTGGAAATATGAGTAATATTACCAGTTTCCAAGCAGACGGCAAAGTTATCGGTAAATGGTTTGTTGGTAATACAGTGGGTGTTGATAGTAACGGACGGCAACTGGCAATGGAAATCAGCGCGGGCACGGATAAGTTGCCATATATTAGTGTTGATTATGCTTATCGCGCTCTTGAGTTCAATAACAACAAAACTGTTACTGCTGTTCATGGATTCGAGATAAACAGTAGAAATGGATTGTCGCAATATTACGTTAGACCTAGTGGATTTGTTGGTGGTTGGGCTCGTGGTTTGGCATTGGTCACTGGCACAGACCCTTCGGTTATTGCAGGTGGAGTTGGATTCTACGGTGGTGGAGATAAGCCAGAATCGGTATATTTGGGAATGGGTGGATCTCCATGGGCAGTTGACCAAGGAATTCAAATCAACACAAATAACCAAATGTCGCTTAAAGCCGGACAATCCGGTGCCGCTATATTTGACGCCGGTGCTAGTGCTATGTTTAGAAATGATAATAGCAAAGCTTGGTATCATATCAGCAAGATAGCTCCGGATTCTGGTATTGTTATTTCACACGGACAGACTCCAGATATGTCAAGGGCTATTGCTGGATTTGGTGCAAATAATATCGATTTGAATCCAAAAACTTACGTCAATAGCGGGCAGTTCCAGATACGAACCGGCGGTAATCCTGTTCTTGAATTCCATGTTCCCGGAAAACACGGTCGTATTATGTGGGTGGATCATACTACAGGCGATTTGAATATCGGCACTTCTAACGGTGCGTTTGGCGAAGCGGCTCGAATTGCGACCATTAATACTTCAACTATTAAACTTAATGGAGCTACGTGGTCTAATGCATATGGACATGCATATGCAGCGCAATATACAACGATTGCTCCGTTTCATGTAGATTACGGAGCAATTCCAGGAGCGAGTGATTATTATCCACTTGTTCGTAGTAGAGGATATGCAACCGGAGCTGGATATACAACTGATGTTGATCTAGGTGTACTTCGTCAAGGTAACACTTGGGGACAAGGTGTTATTCGTGTTGGATCTGCGGAAGCTGGAACAGCTAATACACAAGCGATCTATTATTTTGATATTAGCGGCAACTTTAAAGCTCCTGCTGGCGTATATGATTCCGGTAACAGGGTTTATTCTGCAAGTAACCCACCTCCTGCCGGTGGTCATAATCACTTGAATATTAGAGCGAGAGGTGCAGTTACATTGTGGTCAGGAGATTTAAACGCAGGTAACTTTGCTTTGAATCAGCCATGGACAAACTTTGATATGATCTTGTTCGTTGCCGCTTGGGATAATAATGAATGTTTTACATCAAAAACATTTACACGTTATGACCTAGAGTATATGCAAGCAATTGGTGTAAACTATGATATTTCTGGTGGCGCGGGTGGAATTGAGTGGTACGGACGTTTTGCTGGAGACAACCAAACATTCGTAACATACAAAGAAAACTCTCGCATGAGATTTGTAATTGGTTACAACCTACAAACTGTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a73ba271048c437f1758c22cd12138b238b0427661d0c887119b7ef64f75a58c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5006
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
On Diversity and Genetic Richness: Insights on Aeromonad Phage Diversity through Physicochemical and Molecular Analysis Papa,D.M., Rousseau,G., Tremblay,D., Labrie,S., Gutierrez,T.A., Ramos,J.D. and Moineau,S. 2024-03-24 — GenBank