Protein

Genbank accession
XXJ63423.1 [GenBank]
Protein name
long tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,58
TF
Evidence RBPdetect2
Probability 0,67
Protein sequence
MSEFRRAFRASGLDASNQNVINVANPRTDELFDGINQGYFIDENTVQEYDSTRAHYKVDFIVEFNQRLYKNIIEVNAPEAFDPQKWKKMRNDPEWEDTDSSVGANVGDFLLLTASSAITVTLPASPLTGDTVTIKDGRGVISTYPCSIVAAGGKTIQHYGINGGVQSDTSISFNRPSSTIYLVYNGIAWTYQINQQPYHTYLDDSHASQQGAYLTTGGYFTNVGETVTFDGSVKKIAISLPLNPNVGDTIHLKDVAYLENQTSIQIGVRTVSTGQIVQDPFSGVRSSTISLDTIGAADITFIDDNGTGVWIITLANNPHLWNYVGESSSVTLKPRTRYAIEIADAVPSMTITLPEKPVDGDWIEISHNKTAHKTVTVQVHPNFGDNDPGHGVDEYKVFLDFETYRYQKYRHYVDFVPFFVESFDISDYDSGYSFVLYYDGTRKVWSFGNIATRIDVADELHRKRPGIVPLADPTEALAHGIEYAHSEDAAQPWADQSPLKDHVITVETLDARRAAEDQVGIARIATLDTDEALEESRSGTLVRYPDSAFRHDIIITPRSLNARTATETRRGVVEIATQTETRSTTNDVQVLTPKKFHAAQAEENLTGVAELVKASNNINANGTLGSTANMRSDRTVNGLVDTVYDINDHVRIVTPKMLNEYRATENQPGTLWVAKSSELRVNDSTVDDAIITPKKLAAWKASATIRGIARSATQTEANAITGSGESWTTVFITPETLHNRSATETRRGVAEIATQAEVDAGALDTHIVSPLKLQTWLAYDHFTSDGVLQGAGYGVSGISHTGDIWNGINLEIALATETQRGTLEVATQSEANAQLVPSDTKIITPAKLNARRATESLAGIAELATTGEIDTGTDDVTIVTPAKLLHWTRNSTNSRATESQWGTVHNATIAETFVGNDTVGSTQPYTSYLRNTYAVTPYGLHYALRNYLPLHAKADDSELLDGIDSTQFARSDESDVIDGVYTFTQNDLIVRGDSPRLTLIETDQSNKEWNVLVSLSGLSIREDGSATVRQLFAANGDTSFQNGSGIVRVNDGASATDASRLFVTGAVTETQSTANVDGTYATYSSPAAGTLRQKYLGINNVAKAAEKWVTARTVTLTGDLTGNFTIDGSGNVSTNVQVNDNSHNHSGENITSGTIANARLIKSSRTSQGIVQVTSDVRTADPVNASDPHQALSAGAGKTLSERIDLFTPDGGTGDSVKYRDYIQVGSVRMSTNNQGVLEFTFGHAI
Physico‐chemical
properties
protein length:1246 AA
molecular weight: 135430,70980 Da
isoelectric point:4,97537
aromaticity:0,07705
hydropathy:-0,35161

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage QD01
[NCBI] 		3440539 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XXJ63423.1 [NCBI]
Genbank nucleotide accession
PV785814 [NCBI]
CDS location
range 243538 -> 247278
strand -
CDS
ATGTCGGAATTCCGCAGAGCATTTCGTGCGTCAGGTCTTGATGCAAGTAATCAAAACGTAATCAACGTAGCTAACCCAAGAACTGATGAACTGTTCGACGGTATTAACCAAGGTTACTTTATTGATGAAAACACCGTTCAAGAGTATGATTCAACACGAGCGCACTACAAAGTAGATTTCATCGTTGAATTTAACCAACGTCTCTACAAAAATATTATTGAAGTCAACGCGCCCGAAGCATTCGATCCACAAAAGTGGAAGAAGATGCGTAACGACCCAGAATGGGAAGATACAGACTCTTCAGTTGGTGCTAACGTCGGTGACTTCTTATTGTTGACTGCTAGTTCAGCAATCACAGTTACACTACCAGCATCGCCACTTACTGGCGACACAGTAACAATCAAAGACGGGCGTGGCGTTATTTCAACATACCCATGTTCTATTGTTGCGGCTGGCGGTAAAACTATTCAGCATTACGGTATCAATGGTGGCGTACAATCTGACACAAGTATTTCATTCAATCGCCCTTCAAGCACAATTTATCTTGTGTACAACGGGATTGCATGGACGTATCAGATCAACCAACAACCATACCATACATACCTAGATGACAGTCACGCAAGCCAACAAGGCGCGTATCTGACAACAGGTGGTTACTTCACTAACGTCGGTGAAACTGTTACGTTTGACGGCTCAGTGAAGAAAATTGCGATCTCGCTACCGCTTAACCCGAACGTGGGCGACACAATTCATCTTAAAGATGTTGCGTATCTTGAAAATCAAACGTCAATTCAAATTGGCGTGCGAACAGTATCAACTGGTCAAATTGTTCAAGACCCATTCTCAGGTGTTCGTAGTAGTACGATCAGCTTAGATACAATCGGTGCGGCTGACATCACATTCATTGATGACAACGGCACAGGCGTATGGATTATTACACTTGCGAACAACCCACACTTGTGGAACTACGTAGGTGAATCAAGCTCAGTAACGCTTAAACCACGTACTCGTTACGCGATTGAAATCGCAGATGCTGTACCGTCAATGACGATCACTCTACCAGAAAAACCAGTTGATGGTGACTGGATTGAGATTTCGCATAACAAAACAGCACATAAAACAGTAACAGTTCAAGTACACCCAAACTTCGGTGATAACGACCCGGGTCATGGCGTCGATGAATACAAAGTATTCTTAGACTTTGAAACGTATCGCTACCAGAAATATCGTCATTACGTCGATTTCGTACCATTCTTCGTTGAATCGTTCGATATTAGCGACTATGACAGCGGTTACTCGTTTGTTCTGTACTACGACGGCACACGTAAAGTATGGTCGTTCGGTAACATTGCAACTCGTATCGACGTTGCAGATGAACTACATCGTAAACGCCCAGGTATTGTTCCGTTAGCGGACCCTACTGAAGCACTTGCACACGGCATTGAGTACGCACACTCAGAAGACGCAGCACAGCCATGGGCTGATCAAAGTCCTCTGAAAGATCACGTAATCACGGTTGAAACTCTAGATGCACGTCGTGCAGCAGAAGATCAAGTCGGTATTGCGCGTATTGCTACACTCGATACTGATGAAGCACTTGAAGAATCACGTTCAGGTACGCTTGTTCGTTACCCAGATTCAGCATTCAGACATGATATTATTATCACGCCTCGAAGCTTGAACGCAAGAACTGCTACAGAGACACGTCGTGGTGTTGTTGAAATCGCAACACAGACTGAAACTCGAAGCACAACTAACGATGTACAAGTACTGACACCGAAGAAGTTTCATGCTGCTCAAGCGGAAGAGAATTTAACAGGTGTAGCAGAGCTTGTCAAGGCTTCTAACAACATAAATGCAAACGGAACGCTAGGTTCTACTGCAAATATGCGTTCTGACAGAACAGTTAACGGTCTAGTTGATACAGTATACGACATCAATGATCATGTTCGTATCGTAACACCGAAGATGCTTAATGAATATCGCGCTACGGAGAACCAACCGGGTACATTGTGGGTTGCTAAATCAAGTGAACTTCGCGTTAACGATTCTACAGTAGATGACGCAATCATCACGCCTAAGAAATTAGCAGCGTGGAAAGCAAGTGCAACAATTCGCGGTATTGCTCGTTCAGCGACACAAACTGAAGCTAATGCAATTACTGGCTCAGGTGAATCATGGACTACTGTGTTCATCACACCAGAAACATTGCATAACCGTTCAGCTACTGAAACACGTCGCGGTGTTGCAGAGATTGCTACACAAGCTGAAGTTGATGCTGGTGCTCTTGATACGCATATCGTTAGCCCACTGAAACTACAAACGTGGCTTGCTTACGATCACTTTACAAGTGACGGTGTGTTGCAAGGTGCAGGTTACGGCGTTTCTGGTATCTCTCATACAGGCGATATTTGGAATGGCATCAATCTTGAGATTGCACTAGCGACTGAGACTCAACGTGGTACGCTTGAAGTTGCAACGCAATCTGAAGCAAACGCACAGCTAGTACCGTCAGATACGAAGATCATCACGCCTGCGAAACTGAATGCACGTCGTGCAACAGAATCACTAGCGGGTATCGCTGAACTTGCAACAACTGGCGAGATTGATACAGGTACAGATGATGTAACTATTGTTACGCCTGCTAAATTGCTGCACTGGACTCGTAACAGTACAAACTCACGTGCGACTGAATCTCAATGGGGTACAGTTCATAACGCGACTATTGCAGAAACGTTCGTTGGTAACGACACAGTTGGTTCAACACAGCCATATACGTCTTACTTGCGTAACACATATGCAGTAACCCCGTACGGTTTGCATTACGCATTGCGTAACTACTTACCATTACATGCAAAAGCTGATGATTCAGAATTGCTAGATGGTATCGACAGCACGCAGTTTGCACGTAGTGACGAATCAGATGTGATTGACGGCGTTTACACATTCACACAGAATGATTTGATTGTTCGTGGGGACTCGCCGCGTTTAACACTGATTGAAACAGATCAATCTAATAAAGAATGGAATGTTCTTGTAAGTCTTTCGGGATTGAGCATTCGAGAAGACGGATCAGCAACTGTTCGCCAATTGTTTGCTGCGAACGGTGATACTTCGTTCCAAAACGGTTCGGGTATTGTTCGAGTGAATGACGGTGCTTCGGCAACTGATGCTTCTCGACTATTCGTTACTGGTGCGGTTACTGAGACTCAAAGCACTGCAAACGTCGATGGTACATACGCGACTTACAGCAGCCCAGCAGCAGGAACACTACGTCAGAAGTACTTGGGTATTAATAACGTAGCTAAAGCGGCTGAGAAGTGGGTTACAGCGCGTACAGTGACACTAACTGGCGACTTGACTGGTAACTTCACAATTGACGGAAGCGGAAACGTTTCAACAAACGTGCAAGTTAACGACAATAGCCACAATCACTCTGGTGAGAACATCACTAGCGGTACAATTGCAAACGCTCGACTAATCAAGTCAAGTCGTACAAGTCAAGGTATCGTTCAAGTAACAAGTGACGTTCGTACAGCCGATCCAGTGAATGCTTCAGACCCACACCAAGCTCTATCGGCAGGTGCAGGTAAGACGCTTTCTGAGCGTATCGACTTGTTCACACCAGACGGCGGTACAGGTGACAGTGTTAAATACAGAGACTATATTCAAGTTGGCTCTGTAAGAATGTCAACAAACAATCAAGGCGTGCTGGAGTTCACTTTCGGTCACGCGATATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available.

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Vibrio natriegens Bacteriophage QD01 Zhu,L. and Zhu,D. 2015-12 — GenBank