Protein

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Genbank accession
XAI69899.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGRVQAGMGRPIQGMSQQADRDRINGQCTLQENMIPSALDSLYKRIGTQHVAQLPLSADRPYDERTTIHFYDRGDEEKYFIFIEPDNATPFVFRTDGLACPVSAPQSVWDYMTNSDPLRNISFSTIGDYTFLANSAVTVRARADVQPPNPANRAIVYVQFATYRRTYTVVINGNADGTGGQRYALTMPGSTYSGNEGAANAAAERIKTDDVVQRLAYMMREGIATGDWGSAPQNAAPTYGGAVYPERMNVEVYGNCLFITHPSDNIRTITTIDGANGADMIAVQNTVKSPAYLPPYAPVGWVLLIQNTEGVKKNNYWLKATGTDGSKVKWEESLEGGARLGFDNRTMPHQLYRDQIVNGVPQFKLQAAPWDDRAVGNDTSVPFPSFLNQTVQSVGTFQNRLFFTSGESAIFTRSNDFYNFFKESSQTETDADPIDVFSDSEKVNNIRNSVTVDGDAIFFASNGQFMVEGSKPVTHANVVFKQVTSFPMNIYAKPAITGESIMFAYDAGNWSGIREMFTDSDKDTKTARPITEHVEKLIRGEVRQLSSNPNTNTLIVRTDTDAHIAYIYDWLWQGADKVQAAWHKWTFDNGSKLLHVQFVDDDVYMIFLHADGLVYLEHMPLTNDDNDEGMDFPCRLDRKITIKATWYPNLQKWGFTTPFVIRDADLPNWLAICATGCYRADIGTEFEFARSFGNTNFTTDISLQDPAVATEVTIVLGRKFTSRYIPTQPFIRDQQGLVMSIDRMTMGRMNVNYDRTGAFKVLVSDQMGRQWKYPFYGRSMGSFNNKVGFAPLISGTFPFPVRLFTHDATIEIQSDSHLPLQIRGLEWEGSYQQTGRRL
Physico‐chemical
properties
protein length:838 AA
molecular weight: 94016,32750 Da
isoelectric point:5,40905
aromaticity:0,11456
hydropathy:-0,39200

Domains

Domains [InterPro]
IPR058003
TTP
1–837
IPR058003
XAI69899.1
1 838
Architecture
TTP
TTP 1-837 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAI69899.1
1 838
Domain Start End Length (AA) Confidence
N-terminal 1 139 139 0,9723
Central domain 140 338 200 0,3706
C-terminal 339 838 499 0,2900
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-139
Central
140-338
C-terminal
339-838

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Ulina01
[NCBI] 		3138549 Uroviricota > Caudoviricetes > Autographivirales > Colwellvirinae > Uliginvirus
Host Pseudomonas syringae
[NCBI] 		317 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAI69899.1 [NCBI]
Genbank nucleotide accession
PP179315 [NCBI]
CDS location
range 25935 -> 28451
strand +
CDS
ATGGGCAGAGTTCAGGCGGGAATGGGGCGACCCATCCAAGGCATGAGCCAGCAGGCTGACCGCGACCGCATCAACGGGCAATGCACTCTTCAAGAGAACATGATCCCGTCTGCGCTCGACAGCCTGTACAAGCGCATCGGCACCCAGCATGTGGCACAGTTGCCACTCTCTGCTGACCGTCCGTATGACGAACGAACCACCATCCACTTCTACGACCGAGGCGATGAGGAAAAGTATTTCATCTTCATCGAGCCAGACAATGCCACCCCATTCGTGTTCCGTACCGATGGGTTGGCTTGTCCGGTTAGCGCCCCGCAGTCGGTGTGGGACTACATGACGAACAGTGACCCTCTACGGAACATCTCGTTCAGCACCATCGGCGACTACACCTTCCTTGCGAACAGTGCTGTCACCGTGCGCGCCCGTGCAGATGTCCAGCCGCCCAACCCAGCTAACCGTGCCATCGTGTACGTCCAGTTCGCCACGTACCGCCGTACCTACACGGTCGTCATCAACGGCAACGCGGACGGCACAGGAGGACAGCGGTATGCCCTGACGATGCCGGGTTCGACCTACAGCGGGAACGAGGGCGCAGCCAACGCAGCCGCCGAGCGTATCAAGACCGATGATGTGGTGCAGCGACTTGCCTACATGATGCGGGAAGGTATCGCGACAGGCGACTGGGGTAGCGCCCCGCAGAACGCTGCACCAACTTACGGCGGCGCAGTTTACCCTGAGCGCATGAACGTGGAGGTCTACGGCAACTGCCTGTTCATCACGCACCCGAGCGACAACATCAGGACTATCACGACCATCGACGGGGCCAACGGCGCTGACATGATCGCAGTCCAGAACACGGTGAAGTCTCCAGCCTACCTGCCGCCATACGCGCCAGTGGGTTGGGTGCTGTTGATCCAGAACACCGAGGGCGTCAAGAAGAACAACTACTGGCTCAAGGCAACCGGCACCGATGGTTCCAAGGTCAAGTGGGAAGAGTCGCTGGAAGGCGGCGCTCGTCTGGGCTTCGATAACCGCACGATGCCACACCAGTTGTACCGCGACCAGATCGTGAATGGTGTGCCTCAGTTCAAGCTACAGGCTGCGCCGTGGGATGACCGGGCGGTGGGTAACGACACCTCGGTGCCTTTCCCTTCGTTCCTGAACCAGACCGTGCAGTCCGTGGGTACGTTCCAGAACAGGCTGTTCTTCACCAGCGGCGAGTCGGCGATCTTCACCCGCTCCAATGACTTCTACAACTTCTTCAAGGAGTCGAGCCAGACAGAGACGGACGCTGATCCCATCGATGTGTTCTCGGATAGCGAGAAGGTGAACAACATCAGGAACTCCGTGACCGTGGATGGTGATGCGATCTTCTTCGCCAGCAACGGGCAGTTCATGGTTGAGGGCAGCAAGCCAGTGACCCATGCGAACGTTGTGTTCAAGCAGGTGACCTCGTTCCCGATGAACATCTATGCGAAGCCCGCCATCACTGGTGAGTCGATCATGTTCGCGTATGACGCAGGCAACTGGTCAGGCATCCGCGAGATGTTCACCGACAGCGACAAGGACACCAAGACCGCACGGCCAATCACCGAGCACGTCGAGAAGCTGATCCGGGGCGAAGTGCGCCAGCTCAGCAGCAACCCGAACACCAACACGCTGATCGTCAGGACTGACACCGACGCCCACATCGCCTACATCTATGACTGGTTGTGGCAGGGTGCCGACAAGGTTCAGGCTGCGTGGCACAAGTGGACATTCGACAATGGCTCCAAGCTGTTGCACGTCCAGTTCGTGGATGACGATGTGTACATGATCTTCCTGCACGCTGACGGGCTGGTATACCTTGAGCACATGCCGCTGACCAATGATGACAACGACGAGGGGATGGACTTCCCTTGCCGTCTGGATCGCAAGATCACCATCAAGGCTACGTGGTATCCGAACTTGCAGAAGTGGGGCTTCACCACTCCATTCGTGATCCGGGATGCAGACCTGCCTAACTGGCTAGCCATCTGCGCCACGGGTTGCTACCGGGCAGACATCGGCACCGAGTTTGAGTTTGCCCGATCCTTCGGCAACACGAACTTCACGACCGACATCAGCCTGCAAGACCCAGCGGTTGCCACTGAGGTGACCATCGTGCTGGGCCGCAAGTTCACCAGCCGCTACATCCCAACCCAGCCGTTCATTCGTGACCAGCAAGGATTGGTGATGAGTATCGACCGCATGACGATGGGCCGCATGAATGTCAACTATGACAGGACTGGTGCCTTCAAGGTGCTGGTCAGTGACCAGATGGGTCGCCAGTGGAAGTATCCCTTCTATGGCCGCTCGATGGGCAGCTTCAACAACAAGGTCGGGTTCGCACCGCTCATCAGTGGTACGTTCCCATTCCCCGTCCGATTGTTCACGCACGATGCGACAATCGAGATTCAATCCGATAGCCACCTGCCGCTCCAGATTCGTGGATTAGAGTGGGAGGGCAGCTATCAGCAAACAGGCCGGAGGTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
235fb3cf613d7c05be6652a108d2fe041cf1fb4972af658de8433697ee66dd76
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2841
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50