Protein

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Genbank accession
UPW41699.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MYLKLIRNYAPNELPADKPCLGILQCRELPMSSPVIVLDTLEPPVLAKFGRIPAGSYIVDWCMSPRFGKRTLRLRTVPGRQGILIHAGNFPSQSKGCILVGNRSNIQCRLLDSRLCLDNLHKFLKVDSKKDMMNVALLRIVEDELPF
Physico‐chemical
properties
protein length:147 AA
molecular weight: 16589,55420 Da
isoelectric point:9,43709
aromaticity:0,06122
hydropathy:-0,00476

Domains

Domains [InterPro]
IPR043732
STR
18–124
IPR043732
UPW41699.1
1 147
Architecture
STR
STR 18-124 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Peromfec virus RodF8_16
[NCBI] 		2929360 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW41699.1 [NCBI]
Genbank nucleotide accession
OM869651.1 [NCBI]
CDS location
range 4062 -> 4505
strand +
CDS
ATGTATTTGAAGTTAATCCGTAATTATGCACCTAATGAGTTACCAGCTGATAAGCCATGTCTTGGTATACTTCAATGTCGTGAGCTTCCCATGTCTTCACCTGTTATCGTTCTTGATACTTTGGAGCCTCCGGTTCTTGCAAAATTTGGTCGTATTCCTGCCGGTTCTTATATTGTTGATTGGTGTATGTCTCCACGTTTTGGTAAACGTACTCTCCGTCTCCGCACTGTCCCAGGTCGTCAAGGTATCTTGATTCATGCAGGAAATTTCCCCTCACAGAGTAAAGGTTGCATTCTTGTCGGTAATCGTTCGAATATTCAATGTCGATTGCTTGATTCTCGTTTGTGTCTTGATAATCTTCATAAGTTCCTTAAAGTGGATTCCAAAAAAGACATGATGAATGTAGCTTTGTTGCGCATTGTCGAAGACGAATTGCCATTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
20cb7d63015fe378ae6fddbb5c6c1c7e04e823a733314a2c8c91ec0a4b9add31
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7575
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Towards deciphering the DNA virus diversity associated with rodent species in the families Cricetidae and Heteromyidae Lund,M., Larsen,B.B., Gryseels,S., Kraberger,S., Rowsey,D.M., Steger,L., Yule,K.M., Upham,N.S., Worobey,M., Van Doorslaer,K. and Varsani,A. 2023 37276766 GenBank