Protein

View in Explore
Genbank accession
AUS02268.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGLPVTVYRHTDVGAPVVQPTKPSDWLTIIKACLVDGYGDKDPLGWSLDFVDDINSKMVFRNDESVGGSGGAVQVQFHSGDSVGGHVRFTAANAITAIDEFVEPAGYRTIVTTSNAVYANGWTIIGCGRSFFIRPEGCNSGFFSSTGSNNHSYHKPLWIGDVISAVPNNSHVFTLICATVGITPSSGSTSNTYITNSWGYTGGSSTALLLGCQLYSPDSSGDTANYYCDYRSHNNSPSSYSTDPEVEQIPMILSPVVFNREVYGDKSLPTVGCQMAGVYYSRFYGLYGSAVPITRDLGDESFDYVYGYRGSCFWVQVTGEWYD
Physico‐chemical
properties
protein length:323 AA
molecular weight: 34992,31970 Da
isoelectric point:4,78922
aromaticity:0,13003
hydropathy:-0,14644

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUS02268.1
1 323
Domain Start End Length (AA) Confidence
N-terminal 1 13 13 0,9513
Central domain 14 212 200 0,0033
C-terminal 213 323 110 0,9980
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-13
Central
14-212
C-terminal
213-323

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 2.096.O._10N.286.48.B5
[NCBI] 		2070728 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shewanella
[NCBI] 		22 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS02268.1 [NCBI]
Genbank nucleotide accession
MG592666 [NCBI]
CDS location
range 24552 -> 25523
strand +
CDS
ATGGGATTACCAGTAACAGTTTATCGCCACACAGATGTTGGCGCACCAGTAGTTCAACCGACCAAACCATCAGATTGGCTTACGATAATTAAAGCTTGCTTGGTAGATGGTTACGGTGATAAAGACCCTCTAGGTTGGTCTTTAGACTTCGTTGATGACATTAACAGTAAAATGGTGTTTCGCAATGACGAAAGTGTAGGTGGCTCAGGGGGTGCCGTTCAAGTTCAATTTCACAGTGGCGATTCTGTCGGTGGACACGTTAGGTTTACTGCCGCTAATGCTATAACAGCAATTGACGAGTTTGTTGAACCCGCTGGTTATCGAACCATCGTTACTACATCAAACGCTGTGTACGCCAACGGTTGGACTATTATAGGGTGTGGTAGGTCATTTTTCATCAGACCCGAAGGATGTAATAGTGGGTTTTTCAGCTCGACTGGTAGTAATAATCACTCGTATCATAAGCCGCTTTGGATTGGTGATGTAATATCCGCAGTACCCAACAACAGTCACGTGTTCACCTTAATTTGCGCCACGGTCGGGATTACACCGTCTAGCGGTAGTACTAGCAATACGTATATTACAAATTCGTGGGGGTACACAGGCGGTAGTTCGACCGCACTACTTCTAGGTTGTCAGTTGTACTCACCAGATTCCAGTGGTGATACGGCTAATTATTATTGCGATTATAGATCACATAATAACTCGCCAAGTAGTTATAGTACCGACCCCGAGGTTGAACAAATACCAATGATACTTTCACCAGTCGTTTTTAATCGTGAAGTGTACGGGGACAAGAGTTTACCTACTGTTGGTTGTCAAATGGCAGGTGTTTATTATAGTAGATTTTATGGGCTTTACGGTTCGGCTGTACCAATCACCCGAGACTTAGGTGACGAGTCGTTCGACTATGTATACGGTTACCGTGGTTCTTGTTTTTGGGTGCAAGTGACAGGTGAGTGGTATGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
76fd0fc26d01e72e4be3ef1f700016def91b73c1c8dc505922fdb703cc2fabca
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6612
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank