Protein

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Genbank accession
XLL17424.1 [GenBank]
Protein name
glycoside hydrolase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTELRLNVDSKDIIEAGDYKSAQRGMLTFSKNAVYLGDGDKANKIIDAESLKTEIPKLVEYINISTNNEKFEELKKQTSLEYIFKNWTKVGYTWNNNTKKIEVNNSTAITEINSWYFDPVTNSIVNPVNSTAYIYLLSPIAKDNYSVTLDLTTTFGDNDLVMLCVGEVTVNDVPYNLSFLRNKNASGAAWILKMNVLSWSVDDNVLYSYTLDSSKNDFVLSFSNQSAAYLSDPIELKFERNGNTIKAWTGGGGTKTPREDTLISYTLPSSKPSNMSNDMWTALNLILGKPCVYGLGCNSQPMHFKIKEQNNFSINDIYNAVDKKLYMWNGSTWVGTPKELDIPNNTLISNQSTKETFYYFNNTFNELVKNPLDIIDNKVAKLLTSNMTITLGGAEGFSNDRYGLINAINEAGKYRSVNGAKITIKLPTDITLSDGMLFQSIDLRHVIIEGRSTADRTVLKFADGVAGKIIFNFDYSSGPTFRYLSLQDNAKHSNTGIFLNNNSTTSIENITINGFKNGIELRNSRLTTNGAAKTTTISNCAVNGAYIVISSIFEFEDGIFDGNNMACVCGASTANLIRAEIKNSTTGIRVGSAGIVQATGSVLTNNTKDCNVAYNTVTSAGLVFK
Physico‐chemical
properties
protein length:625 AA
molecular weight: 68954,87400 Da
isoelectric point:5,71911
aromaticity:0,09600
hydropathy:-0,24896

Domains

Domains [InterPro]
DC_1887
STR
1–59
DC_1887 DC_0378
DC_1887
STR
56–219
DC_1887 IPR011050
XLL17424.1
1 625
Architecture
STR
STR
STR 1-219 | STR 308-625
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLL17424.1
1 625
Domain Start End Length (AA) Confidence
N-terminal 1 279 279 0,3627
Central domain 280 614 336 0,7948
C-terminal 615 625 10 0,6527
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-279
Central
280-614
C-terminal
615-625

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CC_R7
[NCBI] 		3384961 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Campylobacter coli
[NCBI] 		195 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLL17424.1 [NCBI]
Genbank nucleotide accession
PQ092953 [NCBI]
CDS location
range 22102 -> 23979
strand +
CDS
ATGACTGAGTTAAGATTAAATGTAGATTCTAAAGATATCATAGAAGCCGGAGATTATAAATCTGCTCAAAGAGGTATGTTAACATTTTCTAAAAATGCTGTGTATTTGGGGGATGGTGATAAAGCTAATAAAATTATAGATGCAGAAAGCTTAAAAACCGAAATACCAAAATTAGTAGAATATATCAATATCTCAACCAATAATGAAAAATTTGAAGAACTCAAAAAGCAAACATCATTAGAATATATATTTAAAAACTGGACTAAAGTTGGGTACACATGGAATAATAATACCAAAAAAATTGAAGTAAACAATTCAACTGCTATTACAGAGATAAATTCGTGGTATTTTGATCCGGTTACTAATTCAATAGTCAATCCAGTTAATTCAACAGCATATATATATTTGTTATCACCTATAGCTAAAGATAATTATTCAGTAACATTAGATTTAACTACAACATTTGGTGATAATGATTTGGTTATGCTATGTGTTGGTGAGGTTACTGTCAACGATGTTCCTTATAATCTATCATTTCTTAGAAATAAAAATGCTTCGGGTGCTGCTTGGATTTTAAAAATGAATGTGCTAAGTTGGTCTGTTGATGATAATGTCTTGTATTCATATACTCTAGATTCAAGTAAGAATGATTTCGTATTAAGTTTTTCTAATCAGTCAGCGGCTTACTTATCGGACCCTATTGAATTAAAATTTGAAAGAAATGGTAATACTATCAAAGCTTGGACGGGTGGCGGCGGAACAAAAACTCCTAGAGAAGATACTCTAATTTCATATACATTACCAAGTTCAAAACCATCAAATATGTCGAATGATATGTGGACTGCATTGAATCTTATTTTAGGTAAGCCGTGTGTTTACGGGCTAGGTTGTAACTCACAACCGATGCATTTTAAAATAAAAGAACAGAATAACTTTAGTATAAATGATATATATAACGCAGTTGATAAAAAATTATATATGTGGAATGGATCAACTTGGGTAGGAACACCTAAGGAACTAGATATACCTAATAATACTCTAATAAGTAATCAATCTACTAAAGAAACTTTTTACTATTTTAATAATACATTCAATGAATTAGTAAAAAATCCATTAGATATCATAGATAATAAAGTTGCTAAATTACTTACTTCAAATATGACTATCACCCTTGGGGGGGCAGAAGGATTTTCTAACGATCGATATGGATTAATTAATGCTATTAATGAAGCTGGAAAATATAGATCTGTAAATGGTGCTAAAATTACCATTAAACTTCCTACAGATATAACATTATCTGATGGCATGCTGTTCCAATCCATTGATTTGAGACACGTGATTATTGAGGGTAGAAGTACTGCTGATAGAACCGTTTTAAAATTTGCTGATGGTGTGGCCGGTAAAATTATTTTTAATTTTGATTATTCTTCAGGGCCGACATTTAGGTATCTATCATTGCAAGATAATGCTAAACATTCTAATACAGGAATATTTTTAAATAATAATTCAACAACTTCAATAGAAAACATTACAATAAATGGCTTTAAAAATGGTATTGAATTAAGAAATTCACGACTCACAACTAATGGAGCTGCTAAAACAACCACTATTAGTAACTGTGCAGTTAACGGCGCTTATATAGTCATTAGTTCTATTTTTGAATTTGAAGATGGTATTTTTGATGGTAATAACATGGCGTGTGTTTGCGGTGCCTCTACTGCAAATTTAATTCGAGCGGAGATAAAAAATTCAACTACAGGTATACGCGTGGGCTCTGCAGGAATAGTTCAGGCTACCGGTTCTGTCTTAACCAATAATACTAAAGATTGTAATGTGGCTTATAACACAGTTACAAGTGCAGGTCTAGTTTTTAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
09cfc86a70c850c5f62e25c6cc9fb9aea61eb00590a07a897a90c26cf28254ef
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7098
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50