Protein

View in Explore
Genbank accession
WKV23776.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGFYGLQIRPNDGGKEINITSGARAASYLGDFTPSFDDNGATVVQVPGLSAGAQMFVLPIRTAGVSTPPGSSTAITLAASSISISGNLVYIQLKGFNKNTDRNKRPVRFRTMQVMGATAGGNYGLALYDATNYSEINDAAISGACVWRGVVQIAPNWQVPGNVPFRESCTVFAHWDSGDVTLDFDETTKTISGWRRGGDIGVNQQNINITAYVCIFSNGAPQIPPVYGLAIWNRAGQCTFSSDNAPLLLRGTVGIQRVPGYYSGAPAGVGRMMVPLCRLGAHELRNSSNVMNYFAGIRMSGNAITAYLGRLNVNYIAVDNWIDFAITQLPLPVIDANDYF
Physico‐chemical
properties
protein length:340 AA
molecular weight: 36429,81090 Da
isoelectric point:8,23966
aromaticity:0,10000
hydropathy:0,00176

Domains

Domains [InterPro]
IPR045604
STR
5–315
IPR045604
WKV23776.1
1 340
Architecture
STR
STR 5-315 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WKV23776.1
1 340
Domain Start End Length (AA) Confidence
N-terminal 1 12 12 0,9348
Central domain 13 211 200 0,0030
C-terminal 212 340 128 0,9989
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-12
Central
13-211
C-terminal
212-340

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YenS-P840
[NCBI] 		3038268 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKV23776.1 [NCBI]
Genbank nucleotide accession
OQ716682.1 [NCBI]
CDS location
range 17848 -> 18870
strand +
CDS
ATGGGATTTTATGGTCTGCAAATCCGACCGAATGACGGTGGTAAAGAAATCAATATTACCAGCGGTGCTCGTGCGGCCAGCTATCTCGGGGATTTTACCCCTTCGTTTGATGATAATGGCGCTACAGTTGTTCAGGTTCCGGGGTTATCAGCCGGTGCGCAAATGTTTGTTCTGCCAATAAGAACGGCGGGTGTTTCTACACCACCTGGTTCATCAACTGCCATCACACTGGCGGCATCTTCTATTTCCATCAGTGGCAATCTGGTTTATATCCAGTTGAAGGGATTCAACAAAAACACGGATAGAAATAAGCGTCCAGTGCGGTTTCGTACCATGCAAGTTATGGGGGCGACTGCTGGCGGGAATTATGGACTGGCGCTATATGATGCTACAAATTATTCGGAGATAAACGATGCCGCTATCAGTGGTGCCTGTGTCTGGCGAGGGGTAGTACAAATCGCCCCTAACTGGCAGGTACCCGGCAATGTGCCTTTTCGGGAAAGCTGTACTGTATTCGCGCATTGGGACAGCGGTGATGTAACACTGGATTTTGATGAGACCACCAAAACGATTTCTGGCTGGCGAAGAGGCGGGGATATCGGGGTTAACCAGCAAAATATCAATATCACGGCTTATGTCTGTATTTTTTCGAATGGTGCACCGCAAATTCCGCCGGTCTATGGACTGGCTATCTGGAATCGGGCTGGGCAATGCACCTTTTCTTCCGATAATGCGCCGTTGTTACTGCGTGGAACCGTGGGAATACAGCGTGTGCCGGGTTATTACAGCGGTGCGCCTGCTGGCGTGGGGCGAATGATGGTGCCGCTTTGCCGTTTGGGTGCCCATGAGCTGAGAAATAGCAGTAACGTCATGAATTATTTTGCCGGTATCCGGATGAGCGGCAATGCTATCACGGCTTATCTTGGGCGGTTAAATGTCAACTATATAGCCGTTGATAACTGGATTGATTTTGCCATTACCCAGCTTCCCCTCCCCGTTATTGATGCCAACGATTATTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
83cdcca97408799ab7f128ab6ccf8e55876a18dbe354c7858734100dd56e9d71
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8328
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of Yersinia phage vB_YenS-840 Hammerl,J.A. 2003-08 — GenBank