Protein

View in Explore
Genbank accession
QBJ00798.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,64
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAIATAIKGRKGGSSSSRTPTEQPDDLQSVAKAKILLALGEGEFAGGLTARDIYLDGTALENADGSQNFSGVAWEFRSGTQAQKYIQGIPGTENEINVGSEVSSSTAWTRTFTNTQLSAVRLRLKWPSLFKQEDDGDLVGYSVNYAFDLQTDGGTWQTVLNTSVTGKTTSGYERSHRIDLPQAGSTWTIRLRKITADANSAKIGDTMTLQSFTEVIDAKLRYPNTALLYIEFDSSQFNGSIPQISCEPRGRVIRVPDTYDPETRTYSGTWTGAFKWAWTDNPAWIFYDLVVTDRFGLGNRLTAANIDKWTLYQVAQYCDQLVPDGKGGSGTEPRYTCNVYIQDRNDAYTVLRDFAAIFRGMTYWGDDQIVALADMPRDVDFTYTHANVVDGKFVYSSSTTKSRYTNALVSWSDPANGYADAMEPVFEQALVARYGFNQLEITAIGCTRQSEANRKGRWGILTNNKDRIVTFDVGLDGNIPQPGYIIAVADRNLSGRDLGGRLSAVNGRVLKLDRVPSAKAGDRIMVNLPSGITQSRTIQSLSGGMVTVTTAFSELPQAEAVWVIESDELYAQQYRVITVTDNNDGTFTIVGANHDPDKFDRIDTGAIIDQRPVSVIPPGNQSPPANIVISSFSVVQQNISVETMRVSWDQAQNAIAYEAQWRRNDGNWVNVPRSSTTSFDVPGIYAGRYLVRVRAINAAEISSGWGYSEEKTLTGKVGNPPKPVGFIASESVVFGIELNWGFPANTDDTLKTEIQYSLTGTEEDAMLLADVPYPQRKYQQMGLKAEQIFWYRAQLVDRSGNESGYTEWVRGQASIDVSDITDVILEGMKDSDTFKDLIENAVDSNEKVAGMADDIKKHADELEQQAKDIQENADGLAQAEVKIDEISVSMDGMTGGVKNSAIAIIQANLAQVATRKTLSASVAGNSAQLDRIDEVIVNDREATARALLSLQTNVNGNTASINSLSDTVSNYQQSTATQINAITATVNGHTASITTNAQAIANVNGQLSAMYNIKVGVTSNGQYYAAGMGIGVENTPSGMQSQVIFLADRFAVTSQAGSTVSLPFVIQNGQTFINDAFFRDASIQFGKITDSLQSNNYVAGSAGWRWGKDGTMQNYGSDSSGGMKQTNVTISIRDANRLRVQIGKLTGVF
Physico‐chemical
properties
protein length:1149 AA
molecular weight: 125190,69160 Da
isoelectric point:4,87920
aromaticity:0,08616
hydropathy:-0,32942

Domains

Domains [InterPro]
DC_0014
STR
1–1149
DC_0014
IPR053171
Unmapped
6–868
IPR053171 IPR015406
IPR055385
ATT
92–218
IPR055385 IPR032876 IPR003961 Coil
IPR013783
STR
622–714
IPR013783
IPR003961
STR
623–717
IPR003961
IPR036116
STR
637–702
IPR036116
QBJ00798.1
1 1149
Architecture
STR
ATT
STR
ATT
STR
STR 1-91 | ATT 92-218 | STR 219-342 | ATT 343-505 | STR 506-1149
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBJ00798.1
1 1149
Domain Start End Length (AA) Confidence
N-terminal 1 153 153 0,7317
Central domain 154 352 200 0,0512
C-terminal 353 1149 796 0,0725
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-153
Central
154-352
C-terminal
353-1149

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PHB10
[NCBI] 		2530035 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBJ00798.1 [NCBI]
Genbank nucleotide accession
MK524177.1 [NCBI]
CDS location
range 50789 -> 54238
strand -
CDS
ATGGCTATAGCAACCGCTATTAAAGGCCGCAAGGGCGGCAGTTCAAGCTCAAGAACTCCTACAGAACAGCCAGACGACCTGCAGTCAGTTGCCAAGGCAAAAATCCTTCTCGCGCTGGGAGAGGGGGAGTTTGCTGGTGGACTTACTGCGCGCGATATTTATCTCGATGGCACCGCACTTGAGAACGCAGATGGTTCACAGAACTTCAGCGGCGTGGCGTGGGAGTTTCGTTCTGGAACTCAGGCGCAAAAATACATTCAAGGGATCCCAGGTACCGAAAATGAAATCAATGTAGGTTCCGAAGTTTCCAGCTCTACAGCGTGGACGCGCACGTTCACCAATACGCAGCTTTCAGCTGTTCGCCTGCGTCTAAAATGGCCTTCTCTCTTCAAACAGGAGGACGATGGCGATCTGGTTGGCTATTCGGTCAACTACGCATTTGACCTGCAGACAGATGGCGGTACCTGGCAGACGGTGCTAAATACCAGCGTGACCGGGAAAACCACCTCTGGTTATGAACGCAGCCACCGTATTGATTTACCTCAGGCGGGCAGCACCTGGACCATCAGGCTGCGCAAGATTACCGCAGACGCAAATAGCGCTAAGATTGGCGACACGATGACGCTGCAAAGCTTCACAGAAGTAATCGACGCCAAATTGCGCTATCCGAACACCGCGCTACTGTACATCGAATTTGATTCGAGCCAGTTCAATGGCTCAATTCCGCAAATTTCTTGCGAGCCCCGCGGGCGTGTTATTCGTGTGCCCGATACCTATGACCCAGAAACACGAACGTACAGCGGCACCTGGACGGGAGCATTTAAGTGGGCATGGACGGATAACCCTGCGTGGATATTTTACGATCTGGTAGTCACTGACCGCTTCGGCCTTGGTAATCGGCTAACAGCAGCCAATATTGATAAATGGACCCTTTATCAGGTCGCTCAGTATTGTGATCAACTGGTACCGGATGGTAAGGGGGGGAGCGGAACTGAACCGCGTTACACCTGCAACGTATACATTCAAGATCGAAATGACGCTTACACTGTGCTGCGAGACTTTGCCGCCATTTTTCGAGGTATGACCTACTGGGGAGACGACCAGATTGTTGCCCTTGCAGACATGCCCAGAGATGTCGATTTTACCTACACGCACGCTAACGTAGTTGACGGCAAATTTGTGTATTCCAGTAGCACAACTAAAAGTCGCTACACAAACGCTCTTGTTTCCTGGTCGGATCCGGCAAATGGCTATGCTGACGCAATGGAGCCCGTCTTCGAGCAGGCTCTGGTGGCGCGCTATGGTTTCAACCAGCTTGAGATCACCGCTATCGGATGCACCCGGCAATCTGAGGCTAACAGGAAAGGGCGCTGGGGGATCCTGACCAACAATAAAGATAGGATTGTAACGTTTGACGTTGGTCTGGACGGCAATATTCCTCAGCCTGGCTACATAATTGCTGTCGCTGACCGAAATCTCTCTGGCCGAGATTTAGGCGGTCGATTATCCGCGGTTAATGGTCGTGTACTCAAACTTGACCGGGTGCCAAGTGCTAAGGCCGGTGACAGGATAATGGTAAACCTGCCGTCGGGTATTACCCAATCCCGGACGATTCAGTCCCTGTCAGGTGGAATGGTTACCGTGACAACCGCCTTTAGCGAGCTTCCACAGGCCGAGGCCGTATGGGTCATTGAGTCTGATGAGCTCTACGCACAGCAGTATCGCGTTATTACAGTAACTGATAATAATGACGGCACGTTCACAATCGTCGGTGCAAATCACGATCCGGATAAATTCGATCGCATTGATACCGGAGCCATCATTGACCAGCGGCCGGTGAGCGTGATCCCGCCGGGCAACCAGTCGCCGCCTGCGAACATCGTCATCAGCTCGTTTTCTGTGGTGCAGCAAAATATCAGTGTCGAAACGATGCGCGTGAGCTGGGACCAGGCGCAGAACGCTATCGCCTATGAAGCGCAATGGCGCCGCAACGACGGGAACTGGGTTAACGTGCCGCGCAGCTCCACCACATCATTCGACGTCCCGGGGATTTATGCCGGGCGCTACCTGGTGCGCGTGCGCGCCATCAATGCTGCCGAAATTTCGTCAGGCTGGGGCTATTCAGAAGAGAAAACGCTGACGGGTAAAGTGGGCAATCCACCGAAGCCGGTTGGCTTCATCGCTTCTGAAAGCGTGGTATTCGGTATCGAGCTCAACTGGGGATTCCCGGCGAATACCGACGACACGCTGAAGACGGAAATTCAGTACAGCCTGACTGGTACCGAAGAAGATGCGATGCTGCTGGCCGATGTGCCTTACCCGCAGCGCAAATATCAGCAGATGGGCCTTAAGGCTGAGCAGATTTTCTGGTACCGCGCGCAGCTGGTGGACCGCAGCGGCAACGAATCAGGGTACACAGAATGGGTGCGAGGACAGGCAAGTATCGATGTTTCTGACATCACCGATGTGATTCTGGAGGGAATGAAAGACTCTGATACCTTCAAAGACCTGATCGAGAACGCAGTGGACAGCAACGAAAAAGTTGCAGGCATGGCGGATGACATTAAAAAGCATGCCGACGAGCTCGAGCAGCAGGCGAAAGACATCCAGGAGAACGCTGACGGGCTGGCGCAGGCCGAAGTGAAGATAGACGAGATTTCTGTTTCGATGGACGGCATGACAGGAGGCGTGAAGAACTCGGCAATTGCGATAATCCAGGCCAACCTCGCTCAGGTGGCCACACGTAAAACCCTGTCGGCTTCGGTTGCCGGTAACAGCGCGCAGCTAGACCGCATTGATGAGGTGATCGTCAATGACAGGGAGGCAACGGCACGCGCATTGCTGAGTCTGCAAACGAACGTCAACGGTAATACGGCATCCATCAACAGCCTGAGCGATACGGTTTCGAATTATCAGCAGTCTACAGCCACGCAGATAAATGCTATTACGGCGACAGTCAATGGACATACTGCCTCTATCACCACGAACGCCCAGGCCATTGCGAACGTAAACGGCCAGCTCAGCGCGATGTACAACATCAAAGTTGGGGTAACGAGTAATGGCCAGTATTACGCTGCAGGAATGGGGATCGGGGTGGAGAATACGCCATCAGGGATGCAGTCACAGGTTATCTTCCTGGCCGACCGTTTTGCCGTTACCTCCCAAGCTGGCAGCACTGTTTCTTTGCCATTTGTTATCCAGAACGGGCAGACATTCATCAATGATGCGTTCTTCCGTGATGCGAGTATCCAGTTCGGTAAAATTACGGATTCTCTGCAGTCTAATAATTATGTTGCCGGAAGCGCTGGCTGGCGCTGGGGTAAAGACGGAACGATGCAGAACTACGGGAGCGACAGTTCCGGAGGCATGAAGCAGACTAACGTCACCATCAGCATTCGGGATGCTAACAGGCTCCGTGTTCAGATAGGCAAACTTACAGGAGTGTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e662d6d080a14d0945620a14dd5d9d552165c48270a6fa28589ebcfd93011bb6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7732
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Characterization of a Novel Temperate Bacteriophage from Gut-Associated Escherichia from Black Soldier Fly Larvae (Hermetia illucens L. [Diptera: Stratiomyidae]) Chen,Y. 2019-06-20 — GenBank