Protein

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Genbank accession
NP_071836.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,79
Protein sequence
MIWHNRKINGPVTAGDWNDDQHMVDREALLEFLGREALLEFLGREALLEFLGREALLEFLGISSGGGGGDGGGGGSGQWVLLDDLEFQSPVQSFTLATDGYDFLRIEYAVIVTDPSNIADQHFAIYPNGDTDRENYSSFMHYTTSGGTHNHLSNWPSPYPLFAMEISSNVQCVNIGNILISLKNGIRRLFVNENSRIDNKNYVSRGEHIARWTNTSSDVTSLNISSQNCVLTGKVAVYGW
Physico‐chemical
properties
protein length:240 AA
molecular weight: 26595,22090 Da
isoelectric point:4,81633
aromaticity:0,10417
hydropathy:-0,26917

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
NP_071836.1
1 240
Domain Start End Length (AA) Confidence
N-terminal 1 71 71 0,9962
Central domain 72 229 159 0,0020
C-terminal 230 240 10 0,9958
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-71
Central
72-229
C-terminal
230-240

Taxonomy

  Name Taxonomy ID Lineage
Phage Methanothermobacter phage psiM100
[NCBI] 		173824 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Methanothermobacter wolfeii
[NCBI] 		145261 Archaea > Euryarchaeota > Methanobacteria > Methanobacteriales > Methanobacteriaceae > Methanothermobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_071836.1 [NCBI]
Genbank nucleotide accession
NC_002628 [NCBI]
CDS location
range 28422 -> 29144
strand +
CDS
ATGATCTGGCATAATCGGAAGATTAATGGCCCGGTGACGGCGGGGGATTGGAATGATGATCAGCACATGGTTGATAGGGAGGCCCTCTTGGAGTTTCTGGGTAGGGAGGCCCTCTTGGAGTTTCTTGGTAGGGAGGCCCTCTTGGAGTTTCTTGGTAGGGAGGCCCTCTTGGAGTTTCTGGGAATAAGCTCGGGTGGGGGTGGTGGAGATGGAGGTGGAGGTGGCAGTGGACAATGGGTTTTACTTGATGATTTGGAGTTTCAGAGTCCCGTTCAGTCATTCACTCTTGCCACGGACGGTTATGATTTCTTGAGGATTGAATATGCTGTTATCGTGACTGACCCTTCTAATATAGCAGACCAACATTTTGCTATATACCCGAATGGGGACACCGATAGGGAGAACTACTCTAGTTTCATGCATTATACGACTTCGGGTGGTACACATAACCATTTGTCCAATTGGCCGTCCCCTTACCCCTTATTCGCAATGGAGATATCATCGAATGTCCAATGTGTGAATATTGGGAATATATTGATTTCACTTAAAAATGGGATTAGGAGGCTGTTTGTCAATGAAAACAGTAGAATAGACAACAAGAACTACGTTTCGAGGGGAGAGCATATTGCTCGATGGACGAATACATCATCTGATGTTACTTCATTAAATATTTCAAGCCAGAACTGTGTCCTGACCGGCAAGGTGGCTGTTTATGGGTGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
317e99b356e3098449bc11f6a20326260cf5bed11918f2680a1cb7ea55e0cafd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6655
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50