Protein

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Genbank accession
YP_003969486.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,97
Protein sequence
MEYWKINDQGRLEALVDFPAMCRFQIIDVKAGDVGAVIPASCHLPKTTEIFWVHHDAVIGGSVLFGEDVYIGKGSVIGGCVTIRRGTKIDSKVNIQDDVEIGECVTIHNNTKIYYASRIRRYVIIGPSVIIRRGVRIDERTIINQRSYIGMDSRISSQCIISNDCIIGDKVSIHEFSTIRSYSKIENCVLIGNNSTIGDRCVIGERVNLANKTIIHECNNIVLGSYHQLVGMGGKSRTITMYIRDRKVVINVGCQRQIGLGEFKARVRDATGTGTDSTDVYKKQMPMIEAAYGVLEAQLKIGIKEKIKNFFKK
Physico‐chemical
properties
protein length:313 AA
molecular weight: 34907,07710 Da
isoelectric point:9,08729
aromaticity:0,06709
hydropathy:-0,07284

Domains

Domains [InterPro]
G3DSA:2.160.10.10
STR
34–116
G3DSA:2.160.10.10 G3DSA:2.160.10.10
IPR011004
STR
49–217
IPR011004
IPR011004
STR
49–215
IPR011004
IPR050179
Unmapped
50–152
IPR050179
IPR056729
STR
89–178
IPR056729
YP_003969486.1
1 313
Architecture
STR
STR 34-259 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_003969486.1
1 313
Domain Start End Length (AA) Confidence
N-terminal 1 27 27 0,0007
Central domain 28 226 200 0,8201
C-terminal 227 313 86 0,9014
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-27
Central
28-226
C-terminal
227-313

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage phiAS5
[NCBI] 		879630 Uroviricota > Caudoviricetes > Pantevenvirales > Chrysonvirus > Chrysonvirus as5
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_003969486.1 [NCBI]
Genbank nucleotide accession
NC_014636 [NCBI]
CDS location
range 141143 -> 142084
strand -
CDS
ATGGAATATTGGAAGATTAACGATCAAGGTCGACTGGAAGCACTTGTAGATTTTCCAGCGATGTGTAGATTTCAAATAATCGATGTTAAAGCCGGCGATGTTGGTGCGGTGATTCCAGCGTCTTGTCATTTGCCGAAGACAACTGAGATCTTTTGGGTGCATCATGACGCTGTTATTGGTGGAAGTGTACTATTCGGCGAAGATGTATATATCGGAAAAGGGTCCGTTATCGGCGGTTGTGTGACTATTCGCAGAGGCACCAAGATTGATAGCAAGGTAAATATTCAAGATGATGTCGAAATCGGCGAATGTGTTACAATCCACAACAATACCAAAATATACTATGCTTCCAGAATTCGCAGATATGTTATTATTGGTCCATCTGTAATAATCCGTCGCGGTGTTCGAATTGATGAAAGAACGATCATAAATCAACGTTCGTATATTGGTATGGATTCTCGTATTTCTAGCCAATGCATCATTTCCAATGACTGTATCATTGGTGACAAAGTTTCGATACATGAATTTAGTACGATTCGGTCTTATAGCAAAATCGAAAATTGTGTATTGATTGGAAACAATAGCACGATTGGTGATCGGTGTGTTATTGGTGAGCGGGTGAATCTCGCAAACAAAACAATCATACACGAATGCAATAATATCGTACTCGGTAGCTATCATCAACTCGTTGGCATGGGTGGTAAATCTCGCACCATTACGATGTATATCAGGGATCGAAAGGTGGTAATCAACGTTGGTTGCCAAAGACAAATCGGACTTGGTGAATTCAAAGCCCGTGTCCGAGACGCAACCGGCACAGGTACCGATAGCACTGATGTTTACAAGAAACAAATGCCGATGATTGAAGCCGCTTATGGTGTTCTTGAGGCGCAGTTGAAAATAGGCATCAAAGAAAAAATTAAAAATTTCTTCAAAAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5da44029e97b65870768fb1e6ee3f9650871d69fd749f8104b52f2f4492bc02a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8699
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage phiAS4 and phiAS5 infecting Aeromonas salmonicida Kim,J.H., Son,J.S., Choi,Y.J., Kim,K.S. and Park,S.C. 2011-11-25 — GenBank