Protein

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Genbank accession
QQO91154.1 [GenBank]
Protein name
tail sheath protein
RBP type
TSP
Evidence DepoScope
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,90
Protein sequence
MSIPISDLVQVDIAISPNAIATDGFGPLLFMSKEFVPTVDVYPVRSYTSLKEVLADFPGGEIAKAATSWYSQKPTPKTFLVGAIKYDTLTPATPATVTAASAAVLATIKLETAATMQLSVSGVQYVTNPIDFSSAEDFDGVANLVTTALSSVGAGVTVTQEAGKFKLTTSATGINATISNVGGKVGEVLKLQYSDSAVIVAGKNELSISSDLSNIADAPFNFFYVGLDRQYRGKTSPVDNQMSVAKWCEASSKVFGWGDNDKNILINGTNNSFRRAKNQNLRNTLCVYDASANGDEYPEISILGRASTVNFNVANSVLILAYKKGPGISTADLSSGQVSALLSCGGNAFISVAGNVMFYNGRMADGTWFDSVQGVEWLTQKVRLNVFNLFYTSTTKIPWTDTGVAMVNQQVTLALELAKTNGLIAPGYDNEGVFYPEGYKVISTPLELLQSQKGERIWEGTSFIAIGSGAIQGAVISGNFIQ
Physico‐chemical
properties
protein length:482 AA
molecular weight: 51194,27450 Da
isoelectric point:4,94422
aromaticity:0,09336
hydropathy:0,08610

Domains

Domains [InterPro]
IPR021808
STR
5–428
IPR021808 DC_0576
QQO91154.1
1 482
Architecture
STR
RBD
STR 5-428 | RBD 429-482
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQO91154.1
1 482
Domain Start End Length (AA) Confidence
N-terminal 1 158 158 0,9725
Central domain 159 357 200 0,1005
C-terminal 358 482 124 0,1039
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-158
Central
159-357
C-terminal
358-482

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage PYps4T
[NCBI] 		2801359 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia pseudotuberculosis
[NCBI] 		633 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO91154.1 [NCBI]
Genbank nucleotide accession
MW147600 [NCBI]
CDS location
range 34213 -> 35661
strand +
CDS
ATGTCAATCCCAATTTCTGACTTAGTTCAGGTTGATATCGCAATCTCCCCGAACGCCATTGCGACTGATGGTTTTGGGCCGTTGCTCTTCATGAGCAAAGAGTTTGTACCGACCGTTGATGTATATCCGGTTCGCTCGTACACCAGTTTGAAAGAAGTTCTCGCAGACTTCCCTGGTGGCGAGATTGCTAAAGCTGCTACCTCCTGGTATTCGCAGAAGCCAACTCCGAAGACTTTCCTGGTCGGTGCTATCAAGTATGATACCCTGACCCCAGCAACTCCTGCTACTGTTACTGCTGCATCTGCTGCTGTACTGGCAACGATTAAGCTAGAAACTGCCGCAACCATGCAGTTAAGTGTTAGCGGTGTTCAGTATGTTACTAACCCGATTGACTTCTCCTCTGCTGAAGACTTCGACGGAGTTGCAAATTTGGTAACTACTGCACTGTCTTCCGTTGGTGCTGGCGTAACTGTTACTCAAGAGGCTGGTAAGTTTAAACTGACTACCTCTGCAACTGGCATCAACGCAACTATCAGCAACGTTGGTGGTAAAGTTGGTGAAGTGTTGAAGCTGCAATATTCTGACAGTGCAGTTATTGTTGCTGGTAAGAACGAGCTATCCATCTCTTCCGACTTGTCTAATATTGCAGATGCTCCATTCAACTTCTTCTATGTAGGCCTTGACCGCCAGTATCGTGGCAAAACCTCTCCAGTAGACAACCAAATGTCTGTGGCGAAGTGGTGTGAAGCATCCAGCAAAGTATTTGGCTGGGGTGATAACGACAAGAACATTCTTATCAACGGTACTAATAACAGCTTCCGTCGTGCTAAGAACCAGAACCTGCGTAACACTTTGTGTGTTTACGATGCTTCTGCGAATGGTGATGAATATCCGGAAATTTCTATTCTGGGTCGTGCATCAACTGTTAACTTCAACGTTGCAAACTCTGTTCTTATTCTGGCATACAAGAAAGGTCCAGGTATTTCCACTGCTGACTTGTCTTCTGGTCAGGTAAGTGCACTGCTTTCTTGTGGTGGTAACGCATTCATTTCTGTTGCTGGCAACGTAATGTTCTACAACGGTCGTATGGCTGACGGCACATGGTTCGACTCCGTACAAGGTGTTGAATGGCTGACTCAGAAAGTTCGACTGAACGTGTTCAACTTGTTCTACACCTCCACTACCAAGATTCCTTGGACGGACACTGGTGTAGCAATGGTTAACCAGCAAGTAACCCTGGCGCTTGAACTCGCTAAGACTAACGGCCTCATTGCCCCTGGCTATGATAACGAAGGCGTCTTCTATCCAGAAGGCTACAAAGTTATTTCTACTCCGTTAGAACTCTTGCAGTCGCAGAAGGGTGAACGTATTTGGGAAGGTACTTCCTTTATTGCTATCGGTTCCGGTGCAATCCAGGGTGCTGTAATCTCTGGCAACTTCATTCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
387008bc037c27f3eb0b1f4ddcd38c70c19df782f0bc5bac1dadd40b48587229
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8808
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome of Yersinia pseudotuberculosis phages Hammerl,J.A. and Hertwig,S. 2018-05-10 — GenBank