Protein

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Genbank accession
ANY92506.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MATVKKLGALAADIQSLMPDNNEGFIVPASARELYDNIMVSVIDAKGVLDMTNNTVEQALSATATPVINWTATYKDDGMDFNTAQGSVTAYAQAGWWHEFNFVCTIAGVQNRVVTATLYINDQPTTVQSQVRLDGANSPVIIQLDALPTVTGAADTFSVKLSTDQPTNVLIPRGFMQIVRKPTQ
Physico‐chemical
properties
protein length:184 AA
molecular weight: 19838,24810 Da
isoelectric point:4,54322
aromaticity:0,07065
hydropathy:0,01793

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VP48
[NCBI] 		1874018 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANY92506.1 [NCBI]
Genbank nucleotide accession
KX371615.1 [NCBI]
CDS location
range 1131 -> 1685
strand -
CDS
ATGGCTACGGTCAAGAAACTAGGCGCACTAGCGGCTGATATTCAGTCGTTAATGCCTGACAACAATGAGGGCTTCATCGTGCCAGCTTCGGCACGTGAGCTTTACGATAACATCATGGTCAGTGTTATTGACGCCAAGGGCGTACTAGACATGACTAACAACACAGTTGAGCAAGCACTGAGTGCAACTGCTACGCCTGTGATTAACTGGACAGCCACGTACAAAGACGACGGTATGGACTTCAACACTGCACAAGGCTCAGTCACTGCGTATGCACAAGCTGGCTGGTGGCACGAGTTCAACTTCGTATGTACTATTGCAGGTGTCCAGAACCGCGTTGTAACAGCTACTTTGTACATCAATGACCAACCTACTACTGTACAGAGTCAGGTACGTCTAGATGGTGCTAACAGTCCTGTAATCATCCAGCTCGACGCTTTACCTACAGTTACAGGTGCTGCTGACACGTTCAGTGTGAAGTTAAGTACTGACCAACCGACTAACGTGCTAATCCCTCGTGGGTTCATGCAGATTGTTCGGAAACCAACTCAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
6f02c31de33b4a2d97ff282bc377dede83a77d6b4d1ee56f68eac50f64565dbb
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5439
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of Vibrio parahaemolyticus phage VP48 isolated from sea water Qiao,H., Xu,X.L., Fei,W.B., Huang,J., Cong,Y., Fu,Y.M., Zhou,S.X., Mandeville,R., Wang,W.B. and Sheng,C.J. 2019-06-06 — GenBank