Protein

View in Explore
Genbank accession
QYW06480.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,60
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MEDLRIQGSGGGSKPEKAHTPVEAPNTLQSFIKGKILDLIAYGPIKGLRNGLKSVYLDNTPVENADGTMNFNGIKLTTRLGYPDQEYIEGFSDVENTFEINTEVKFANPVIRSVSNNNADSVIVTVQVQALTETQENGDATATTLPLAVDVRSGGGAWRIGITDLIQGKTTSPYPVSYRVLLEGEGPFDIRVRRLNQESTTQKKQDALSWTLLTEVLDKKFSYPNMAYVGIEIDSKLFGNQIPARSYDVDLSIVSVPSNYDPITRAYTGLWDGTFKQEWTDNPAWCFYDLATHPVIGAGLENVDKWVLYRIGQYCDELVEDGYGGMEPRFTCNTIFADQEDAVSALNTFASCFRGMAYWGTNTMVPVADMPDRIAKVVSPANVIGGDFDYSGTGMRERHSVCVVMWNDMDDAGKAVPEVYEDPDSVVLFGWRETRVTAVACSSRGQARRLAKWILYSERMETQTVNYKATMDHADLRPGELIELADPDYQGARMGGRIISGTVRKLTLDAVPSAVEQLSASAWFISVPMPNGSIEKAEVSSFTGNDANLLRNLSDVPIKGAMWALSCLELELPQFRVVSVNEETNGEYTINATEYDPRKYDIVEKGLILPERPTSLFPSGSIAPPLDLSFEVYTYFAGADRHQGLVISWTPPKDVRVNEYILDVKSPADAGFVTVYNGAGVSFDLKDAMGGEWVIRVRSVASGIPGEWVTRTVQIATLLLPVPPDSVKVTVGTFNITLTPVSAYPNLLWEFWRSDVPLSFDQIESNATKLPTGTYLVDANLRSGKTYFYFVRGTNQYGRSAWFSTQGTTLEDFDDIMEHVKEDIINGELYQIINGQITEVATEVATEVSTSVVADAVAELQAQIDGLVDALAYVKENPYNEGEVVRSGKNLWMALVNVPADPTGASGPPNPLYWKNIGDILEEANGLAVQVQQNKTDIKTVDGKVTAAASQLTVLQAKARQNVGEGDLQDALAGYKAQASFTQEVKVLANTDQALSQRITAFSVSLDGNSAKLSTLEQTVVTNEQALSQRITDFSAEYKSNKATVQTSIKAVSDANSATAAAVTTLNTDYQGNKVTVQDSIKAVSDAQSATATSLSTLTTDYQGNKVTVQTNIKAVSDAQAATAASLSLLNTDYQGNKSSVQSDIKVVSDAQKATATKVDTLRTDVNGNSATIQTVQQTANSAYGTANTANGTANTANGKADSLNQKLTAQYAIKLQLAVDGRTYAAGMGIDITSQGGITQSQILFQADRIAMLNVNSGGVVLPWLLENGTVYMNTAVIKNGTVSFLQIADDLQSTNWSAANRTGWKFAKAGNLTIYANGAKGSSEFNGAEIIMRDTNGTVRIKMSVN
Physico‐chemical
properties
protein length:1348 AA
molecular weight: 146139,94620 Da
isoelectric point:4,73539
aromaticity:0,08012
hydropathy:-0,22203

Domains

Domains [InterPro]
DC_0463
STR
3–901
DC_0463 DC_0292 DC_1604
IPR053171
Unmapped
6–1322
IPR053171
IPR055385
ATT
94–218
IPR055385 IPR032876 IPR057587 DC_2230 IPR015406
QYW06480.1
1 1348
Architecture
STR
ATT
STR
ATT
STR
ATT
STR
RBD
STR 3-93 | ATT 94-218 | STR 219-337 | ATT 338-498 | STR 499-722 | ATT 723-821 | STR 822-1126 | RBD 1130-1348
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYW06480.1
1 1348
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,7898
Central domain 156 354 200 0,0328
C-terminal 355 1348 993 0,0560
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-155
Central
156-354
C-terminal
355-1348

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage UAntarctica
[NCBI] 		2856996 No lineage information
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYW06480.1 [NCBI]
Genbank nucleotide accession
MZ605292.1 [NCBI]
CDS location
range 39370 -> 43416
strand +
CDS
ATGGAAGATCTGCGCATCCAGGGATCGGGCGGCGGCAGCAAGCCGGAGAAAGCGCACACACCTGTAGAGGCACCAAACACTCTGCAGAGTTTCATCAAAGGCAAAATTCTTGACCTCATTGCTTATGGCCCAATCAAGGGTCTGAGGAATGGGCTGAAGTCCGTGTACCTGGACAACACGCCGGTAGAGAACGCCGACGGTACTATGAACTTCAACGGCATCAAGCTGACCACCCGTCTTGGTTACCCAGATCAGGAGTACATCGAAGGGTTCTCTGATGTAGAAAACACCTTTGAAATCAACACTGAGGTGAAGTTTGCGAACCCGGTAATCCGCTCGGTCAGCAACAACAACGCAGACTCGGTCATCGTCACCGTCCAAGTCCAGGCTCTGACAGAAACGCAAGAGAACGGGGATGCTACGGCTACCACCTTGCCGCTGGCGGTTGACGTGCGTAGTGGCGGGGGTGCCTGGCGCATTGGCATTACCGACCTCATTCAGGGCAAGACCACTTCCCCCTACCCGGTTTCGTATCGAGTTTTATTGGAAGGCGAAGGCCCATTCGACATCCGTGTACGCCGGCTAAATCAGGAAAGCACGACGCAGAAGAAGCAGGACGCGCTGTCCTGGACACTGCTGACTGAGGTGCTGGACAAGAAGTTCAGCTACCCAAACATGGCCTATGTCGGCATCGAGATCGACTCGAAGCTGTTCGGCAACCAGATCCCCGCGCGCAGCTATGACGTAGACCTGTCCATTGTCAGCGTGCCGAGCAACTATGACCCTATCACCCGTGCGTACACGGGGCTGTGGGATGGCACTTTCAAGCAGGAGTGGACGGATAACCCTGCCTGGTGCTTTTACGACCTGGCCACCCACCCGGTAATCGGCGCTGGCCTTGAGAACGTAGACAAGTGGGTTCTCTACCGCATCGGCCAATACTGCGATGAGTTGGTGGAAGATGGCTATGGCGGCATGGAGCCGCGGTTCACCTGCAACACGATCTTCGCGGACCAGGAAGACGCGGTATCGGCGCTGAACACGTTCGCCAGCTGCTTCCGTGGCATGGCCTACTGGGGCACCAACACCATGGTGCCGGTTGCAGATATGCCTGACCGCATCGCCAAGGTGGTCAGCCCGGCAAACGTTATCGGCGGTGACTTCGATTACTCGGGCACAGGGATGCGCGAGCGCCACTCTGTTTGCGTCGTCATGTGGAACGACATGGATGACGCGGGCAAGGCGGTTCCAGAGGTCTATGAGGACCCTGATAGCGTTGTATTGTTTGGCTGGAGGGAAACCCGGGTAACCGCAGTTGCGTGTAGCTCTCGAGGCCAGGCACGCCGCTTGGCTAAGTGGATCTTGTACTCGGAGCGGATGGAAACCCAGACGGTCAACTACAAAGCCACCATGGACCATGCAGACCTGCGCCCTGGCGAGCTTATTGAGCTGGCTGACCCAGACTACCAGGGTGCCCGCATGGGCGGCCGGATCATCTCCGGGACGGTCCGTAAACTGACTTTGGACGCTGTGCCAAGCGCGGTAGAGCAGCTGTCAGCGTCTGCCTGGTTCATCAGCGTGCCTATGCCCAACGGCAGCATCGAGAAGGCCGAGGTCAGCTCGTTCACCGGCAATGACGCCAACCTGCTCAGGAACTTGTCTGACGTTCCAATCAAGGGCGCGATGTGGGCGCTCAGCTGCCTCGAGCTGGAGCTGCCGCAGTTCCGTGTGGTCTCTGTAAACGAAGAAACCAACGGCGAATACACGATCAATGCCACGGAATACGACCCTCGGAAATACGACATCGTTGAGAAGGGTCTGATCCTCCCAGAGCGGCCTACCAGCCTTTTCCCTTCTGGGTCTATTGCCCCGCCTCTGGATCTGTCGTTTGAGGTCTACACCTACTTTGCCGGCGCCGACAGGCACCAGGGCCTGGTCATCAGCTGGACGCCTCCTAAAGACGTTCGGGTGAACGAGTACATACTCGACGTAAAGTCGCCGGCCGATGCCGGGTTCGTGACCGTCTACAACGGCGCGGGGGTTTCGTTTGACCTCAAAGACGCCATGGGCGGCGAGTGGGTTATCCGTGTCCGCTCGGTAGCCTCAGGCATCCCGGGTGAGTGGGTCACGCGCACCGTGCAGATCGCCACGCTGTTGCTGCCTGTGCCACCGGACTCTGTGAAGGTCACAGTGGGCACGTTCAACATCACTCTGACACCGGTCAGCGCCTACCCTAACCTGCTCTGGGAGTTCTGGCGCAGTGATGTACCGCTGAGCTTTGATCAGATCGAGAGCAACGCCACGAAGTTGCCTACCGGCACCTACCTGGTGGATGCCAACCTGCGCTCGGGCAAAACCTACTTCTACTTTGTGCGTGGCACCAACCAGTACGGCCGGTCAGCTTGGTTCAGTACGCAGGGCACCACGCTTGAAGACTTTGACGACATCATGGAGCACGTCAAAGAGGACATTATCAACGGCGAGCTGTACCAGATTATCAACGGGCAGATCACCGAGGTGGCGACAGAGGTCGCGACGGAAGTGTCGACCAGCGTTGTGGCAGACGCTGTAGCAGAGCTGCAAGCACAAATTGACGGCCTGGTAGACGCGCTGGCCTACGTCAAAGAGAACCCTTACAACGAAGGGGAGGTGGTTCGTAGCGGCAAGAACCTTTGGATGGCGCTGGTAAACGTGCCGGCAGATCCAACAGGGGCCAGCGGCCCGCCTAACCCTCTGTACTGGAAAAACATTGGGGACATCCTCGAGGAAGCCAACGGATTGGCTGTCCAAGTCCAGCAGAACAAGACCGACATCAAGACGGTAGACGGCAAGGTCACAGCTGCTGCAAGCCAACTTACCGTGCTGCAGGCCAAGGCCAGGCAGAACGTCGGTGAAGGGGATCTGCAGGACGCCCTGGCCGGCTATAAGGCACAGGCTTCGTTCACCCAGGAAGTGAAGGTGCTGGCCAACACCGACCAGGCCCTGTCGCAGCGGATCACCGCATTCTCGGTATCCCTGGATGGCAACAGCGCCAAGCTGTCCACCCTCGAGCAGACCGTGGTCACAAATGAGCAGGCCCTGTCGCAGCGGATCACTGACTTTAGCGCGGAGTACAAGAGCAACAAGGCCACTGTGCAGACAAGCATCAAGGCTGTCTCGGATGCAAACTCGGCTACGGCAGCGGCTGTAACAACGCTCAATACCGACTACCAGGGCAATAAGGTCACGGTTCAGGACAGCATCAAGGCAGTGTCCGATGCCCAGAGCGCCACGGCAACGTCTCTCAGCACCCTGACCACGGATTACCAAGGGAACAAGGTAACCGTCCAGACCAATATCAAAGCCGTGTCGGATGCCCAGGCCGCTACAGCAGCCTCTTTGAGCCTGCTGAATACCGACTACCAGGGCAACAAGTCCTCGGTCCAAAGCGACATCAAGGTGGTGTCCGACGCACAGAAAGCAACCGCGACCAAAGTCGACACGCTGCGCACCGACGTCAACGGTAACTCAGCGACAATCCAGACTGTGCAGCAGACCGCGAACTCGGCCTACGGTACAGCCAACACTGCGAACGGTACGGCAAATACTGCTAACGGTAAGGCTGACTCGCTGAACCAGAAGCTCACCGCGCAATACGCGATCAAGCTGCAGCTGGCAGTTGACGGTCGGACTTACGCGGCCGGCATGGGGATCGACATCACCTCGCAGGGCGGCATCACGCAAAGCCAGATCTTGTTCCAGGCGGACCGGATCGCTATGCTGAACGTCAACTCGGGAGGCGTGGTGCTACCATGGCTCCTTGAGAATGGCACGGTCTACATGAACACTGCGGTGATCAAGAACGGCACCGTGAGTTTCCTGCAGATCGCGGACGATCTACAGTCAACCAACTGGTCTGCGGCTAACCGTACAGGCTGGAAATTTGCCAAAGCTGGTAACCTCACCATTTACGCAAACGGTGCCAAGGGCAGCTCGGAGTTCAACGGGGCTGAGATCATCATGCGAGACACGAACGGTACGGTCAGAATCAAGATGAGTGTTAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
073dfa9e8219b427940d77b78f9105ecb8c7c5d714e6a796bd9c1659472f5d35
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8091
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence and phylogenomic analysis of the two lytic bacteriophage isolated from terrestrial biotopes of Antarctica Holovan,V., Rabalski,L., Zlatohurska,M., Andriichuk,O., Budzanivska,I., Shevchenko,O. and Gupalo,A. 2021-12-16 — GenBank