Protein

View in Explore
Genbank accession
XCD03758.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MIGGTSPVIIFNFPNAGLLGSLGIPTVLPIYLDEATTGVMSDNAEDTIKIETQIFKNIAYQRRVNHNLNITLRVIKDNIVATTLLSVMSKIYELINSTNPETQALLSDREDGGYFVTIYYDSSFMLKGYLNDYRKNTIDGTNQIEVKMSFGSIPQKPIVATILPKVENAIDILARG
Physico‐chemical
properties
protein length:176 AA
molecular weight: 19478,17320 Da
isoelectric point:5,13850
aromaticity:0,07955
hydropathy:0,03636

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Dulem virus 29
[NCBI] 		3145747 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCD03758.1 [NCBI]
Genbank nucleotide accession
PP511380.1 [NCBI]
CDS location
range 8885 -> 9415
strand +
CDS
ATGATTGGCGGAACGTCACCAGTAATTATATTTAATTTCCCGAATGCTGGTTTGCTGGGAAGCCTAGGAATACCGACAGTTTTGCCTATTTACTTAGACGAAGCGACAACCGGCGTAATGTCTGACAATGCCGAAGACACGATAAAAATAGAAACGCAGATTTTTAAAAACATTGCATATCAACGCCGTGTAAACCATAATTTAAATATAACGCTAAGAGTTATAAAAGATAATATAGTAGCTACAACTTTGTTGTCGGTCATGTCTAAAATATATGAATTGATTAATAGCACCAATCCAGAAACGCAAGCTTTATTATCTGACAGGGAAGACGGCGGGTATTTTGTTACTATTTATTATGATAGTAGTTTTATGTTAAAGGGTTATTTGAACGATTACCGAAAAAACACTATAGACGGGACTAATCAAATTGAAGTAAAAATGAGTTTCGGCTCTATTCCTCAAAAGCCCATAGTGGCGACTATTCTCCCGAAGGTTGAAAACGCTATAGATATATTGGCGAGGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c77cc28a206b5eb86aebedcff4c2d4ab60f68fc4b581f2920e30acec8472947c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7162
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse circular DNA viruses in blood, oral, and fecal samples of captive lemurs Paietta,E.N., Kraberger,S., Lund,M.C., Custer,J.M., Vargas,K.M., Ehmke,E.E., Yoder,A.D. and Varsani,A. 2024-07-08 — GenBank