Protein

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Genbank accession
BDA81523.1 [GenBank]
Protein name
virion component tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MAFKYTKVQDTDYVREISHTLNSVGDYLQTMSNERDTLPTYSRLVVTDSASLLQTNVVYYLTNIQGFPTQFGASYNGYGMLLKRNPSVNYHTFVFLPYNSSVVYYRVYNGAWQDWQSTLTTENTTNYQKYAFTDEKGQVSNNKSIDIKNTTGYSKSKGTLVDAPTEDSKGWIDYSDTQGGEASQTLFNPTESTSLFTKQKKQAIVKQNPNIIQDSLFTNHVPYTYIFQNDTNYWGTSKGVGRVIRTDKKFKGQNIVELNDTKGSYSTFRGKALTVGEGKDLQVGKTYTLSAYVMTPDVSKLKENYPYIEVSYPSSLDAQSNPTIDSQLNITGLENNQWKRVSVTFTVPSNVVYARPNLRFNIVKSGTNNGGLVYYALPKLEEGSEATPFITNSNDSKQFDELWSNWNEYISKEKLAETATTDILGKVGYFKYPLTKEFLDNLGMDFYTYVGDLPQGFHTFYMQNGAPGNVFNDSVRGTIMLDYSQGDEMSTNKRYAIVECVNNKGVHYSAFFDWGNEPRQIVRQSEMQTLLWEDSSSFDLATGGTITLNDDYTNYKALDFVVYFRLSATYRTIRVYPVASSIVVRDLNLANNNTNANLDTYEGNMSLVDSKTIKADSAKQLTLNIGSGTENIVWNQTNTINIYKIIGVHTV
Physico‐chemical
properties
protein length:651 AA
molecular weight: 73536,84900 Da
isoelectric point:5,60605
aromaticity:0,12596
hydropathy:-0,51997

Domains

Domains [InterPro]
DC_1862
STR
99–455
DC_1862 Coil
G3DSA:2.60.120.260
STR
207–376
G3DSA:2.60.120.260 DC_0448
IPR008979
STR
221–352
IPR008979
BDA81523.1
1 651
Architecture
STR
STR 99-650 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SsapH-Golestan-100
[NCBI] 		2870751 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus saprophyticus
[NCBI] 		29385 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDA81523.1 [NCBI]
Genbank nucleotide accession
LC647030.1 [NCBI]
CDS location
range 47628 -> 49583
strand +
CDS
ATGGCTTTTAAGTACACTAAAGTTCAAGATACAGACTACGTAAGAGAAATATCTCATACATTAAATAGTGTAGGGGACTACCTCCAAACTATGTCTAATGAACGTGATACATTACCAACATATTCTAGGTTAGTAGTTACAGATTCTGCTAGTCTACTACAAACAAACGTAGTATACTACTTAACAAACATACAAGGATTCCCAACACAATTTGGTGCTAGTTATAATGGTTATGGTATGCTATTGAAACGTAACCCATCAGTAAACTATCACACATTTGTATTTTTACCTTACAATAGCTCAGTAGTATACTATAGAGTTTACAACGGAGCGTGGCAAGATTGGCAGAGTACTTTAACTACAGAAAATACTACTAATTATCAGAAGTACGCTTTTACAGATGAGAAAGGTCAAGTAAGTAATAATAAATCTATAGACATTAAGAATACTACAGGCTACAGTAAGAGTAAAGGTACTCTAGTTGATGCACCAACTGAAGACTCTAAAGGATGGATAGATTATTCTGATACACAGGGTGGGGAAGCGTCACAAACACTATTTAACCCTACAGAAAGTACATCGTTATTTACAAAACAGAAGAAACAAGCAATTGTAAAACAAAATCCAAATATTATTCAAGATTCCTTATTTACAAATCATGTACCTTATACTTATATATTCCAAAATGATACAAACTATTGGGGAACAAGTAAAGGAGTAGGTAGGGTAATAAGAACAGATAAAAAATTTAAAGGGCAGAATATAGTAGAATTAAATGACACTAAAGGTTCCTATAGTACTTTTAGAGGGAAAGCACTTACTGTAGGTGAAGGCAAAGACTTACAAGTAGGTAAAACTTATACTCTCTCAGCCTATGTTATGACACCTGATGTAAGTAAACTAAAAGAAAATTACCCTTATATAGAAGTGTCTTATCCATCGTCACTAGATGCTCAATCAAACCCAACTATAGATAGTCAGCTAAATATAACAGGACTAGAGAATAATCAATGGAAAAGAGTATCTGTAACTTTCACTGTACCTAGTAATGTTGTTTACGCTAGACCAAATTTACGGTTTAACATTGTTAAATCAGGAACTAATAATGGAGGTCTTGTATACTATGCATTACCAAAATTAGAGGAAGGTTCTGAAGCTACACCTTTTATTACTAATTCTAACGATTCAAAACAGTTTGATGAACTTTGGTCTAACTGGAATGAATATATTTCTAAAGAAAAATTAGCAGAAACTGCTACTACAGACATTCTAGGTAAAGTAGGATACTTTAAGTACCCTCTAACTAAAGAGTTCTTAGATAACTTAGGTATGGACTTTTACACTTATGTTGGTGACTTACCACAAGGATTCCATACTTTCTATATGCAAAATGGTGCACCAGGTAATGTCTTTAATGATTCTGTCAGAGGTACTATCATGCTTGATTACTCTCAAGGTGACGAGATGTCTACTAATAAACGGTATGCAATAGTAGAGTGTGTAAATAATAAAGGGGTTCATTATAGTGCTTTCTTTGATTGGGGTAATGAGCCTAGACAAATAGTTAGACAATCTGAAATGCAAACACTTCTATGGGAAGACTCTAGTTCTTTTGACTTAGCAACAGGCGGAACGATAACTTTAAATGATGATTACACTAACTATAAAGCTCTAGACTTTGTGGTATACTTCAGGTTATCTGCTACCTATAGGACTATAAGAGTATATCCAGTTGCATCTTCTATAGTAGTTAGAGACCTTAACTTAGCTAATAATAACACCAATGCTAATTTAGATACTTATGAAGGTAATATGAGTCTTGTAGATAGTAAAACAATAAAAGCAGACTCTGCTAAACAATTGACACTGAACATAGGTTCAGGTACTGAAAACATAGTATGGAATCAAACAAATACAATTAACATATATAAAATAATAGGTGTACACACAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3269642f2e3062599f9a1b6f856441a577451a4a1ba16c488d6584309aa47e28
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6502
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of phage genome Yazdi,M., Ghaemi,E.A., Shirzad-Aski,H., Mohebbi,A., Tabarraei,A., Sabzali,S. and Rafiee,M. 2013-08-01 — GenBank