Protein

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Genbank accession
WIT94420.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MATSLEGTVQSLLQGVSQQVPRERQPGQLGAQLNMLSDPVSGIRRRPPGEIVWESTIDNPGLDSLFTEYVERGTDGRHLLINTSNGNWWLLAKNGKTVLNSGNDPYFVTTVGQTSLQTASIAGLTYILNTEMAPSTTVDNTGRIDPSTTGFFYVKSAAFQKRWNVTVTSAGVDYSGDYSAPAAGSTSGNAEEVSGAYVAQQLRDSLISNGLPAGNVSVRGAYLFFYGLSNCVVSSDAGDTYAGVSNQSRVDQEQDLPAQLPAEADGAMCRVGTASSETAWYQFDYSTRTWSEVGAYGSITKITNMPRELAADDNIIVRDWEGRLAGNDDNNSDPGFVENGYITGIAAFQGRLVLLSGSSVDMSASGLYQRFYRSTVTSLLDTDRISISSASAQDSVYRTAVQFNRDLVLFANSMQAVVPGSAVLTPTNASISITSTYDCDSRVTPVMAGQTVIYPNKRNDSYAGILELIPSPYTAAQYTTQDATVHLPRYIPGRVLQMQNSSVTNMAFSRMSGERNSLLVYEFMWGGSDGAKMQAAWHKWSFPYPLLSVQALEDEVFLYMQGPSPSNKLLIVSMDPREGYQLGSEYREAYSDLQKQVQVQGGVFEVPAVLRPVGWADNYKEELILTYLPSNPMGPTEVGIKEIAGENTLRVVRGVPDGTYVIGRRYRSTFTLTTPILRDQNDKLVGSGHVRLLRLDVAVRNSGHFDVQVLDTPRDVNWGGELTGILMNSKELTLGQALRMDLVTITVPCRTNADTTEVSLFTEGSMELNVLDISYILRYNQRRRRI
Physico‐chemical
properties
protein length:786 AA
molecular weight: 85972,21240 Da
isoelectric point:4,95593
aromaticity:0,08651
hydropathy:-0,25191

Domains

Domains [InterPro]
DC_0058
STR
1–786
DC_0058
IPR058003
TTP
5–786
IPR058003
WIT94420.1
1 786
Architecture
STR
STR 1-786
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WIT94420.1
1 786
Domain Start End Length (AA) Confidence
N-terminal 1 145 145 0,9934
Central domain 146 344 200 0,1515
C-terminal 345 786 441 0,0983
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-145
Central
146-344
C-terminal
345-786

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnP_ZX11
[NCBI] 		3053254 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WIT94420.1 [NCBI]
Genbank nucleotide accession
OR050521 [NCBI]
CDS location
range 27645 -> 30005
strand +
CDS
ATGGCTACGTCCCTAGAGGGTACCGTTCAGAGTCTACTGCAGGGCGTCTCCCAGCAGGTTCCAAGAGAGCGCCAACCAGGACAACTGGGGGCGCAGCTGAACATGCTCAGCGACCCGGTTTCCGGTATACGCCGCAGACCTCCGGGTGAGATTGTCTGGGAGAGTACGATTGATAATCCAGGTCTCGATTCCCTGTTCACTGAGTACGTCGAGCGTGGAACTGACGGCAGGCATCTGCTGATTAATACCAGCAATGGTAACTGGTGGCTGCTGGCTAAGAATGGAAAGACCGTCCTTAACTCCGGCAATGACCCGTACTTTGTCACCACCGTAGGCCAGACCTCTTTGCAGACCGCAAGTATTGCCGGGTTGACTTATATCCTGAATACGGAGATGGCCCCTAGCACAACCGTGGACAATACTGGGCGTATAGACCCCAGCACTACTGGGTTCTTCTACGTTAAGTCTGCAGCATTCCAGAAACGTTGGAACGTCACAGTTACCTCAGCTGGGGTGGATTACTCCGGAGACTACTCCGCCCCGGCTGCTGGTAGCACCAGCGGAAACGCCGAGGAGGTATCAGGTGCCTACGTTGCCCAGCAGCTGCGAGACTCTCTTATATCAAACGGGCTGCCAGCGGGGAACGTTAGCGTACGTGGTGCGTACTTGTTCTTCTATGGGTTGAGCAACTGCGTGGTATCCTCTGACGCTGGGGATACTTACGCCGGGGTATCCAACCAGTCTCGTGTAGACCAGGAGCAGGACCTGCCCGCACAGCTCCCGGCAGAAGCTGACGGGGCAATGTGTCGTGTAGGTACAGCTTCTTCCGAGACAGCATGGTACCAGTTCGATTACAGTACCCGCACCTGGTCTGAGGTGGGGGCATACGGCAGCATCACCAAGATTACGAACATGCCCAGAGAGCTCGCCGCGGATGATAACATTATTGTGCGGGATTGGGAGGGGCGCTTAGCGGGCAACGACGACAACAACAGCGACCCCGGATTCGTCGAGAATGGATACATCACTGGGATTGCAGCTTTCCAGGGCCGCCTGGTTCTGCTTAGCGGTAGCTCCGTGGATATGTCGGCCTCGGGCCTATATCAGCGCTTCTACCGCTCTACTGTGACGTCTCTGCTGGACACGGACCGTATCAGTATTAGCTCTGCGTCTGCGCAGGATTCGGTGTACCGCACTGCTGTGCAGTTCAACCGGGACCTGGTCCTGTTTGCTAACAGCATGCAGGCGGTTGTGCCGGGTTCGGCAGTACTTACACCAACTAACGCAAGCATTAGTATTACCAGCACCTACGATTGTGACAGCCGTGTTACCCCGGTAATGGCGGGTCAGACAGTAATCTACCCGAACAAGCGCAACGACAGCTACGCGGGTATATTGGAGTTAATCCCATCACCTTACACCGCGGCGCAGTACACTACGCAGGATGCCACGGTGCACCTACCCCGGTATATTCCAGGCAGGGTATTGCAGATGCAAAACTCCAGTGTCACCAATATGGCCTTCTCGCGCATGTCTGGAGAGCGTAACAGTCTGCTGGTCTACGAGTTCATGTGGGGCGGAAGTGACGGCGCTAAGATGCAGGCGGCGTGGCATAAATGGTCGTTCCCGTATCCACTCCTGAGCGTACAGGCGCTGGAGGACGAGGTGTTCTTGTACATGCAAGGGCCCAGTCCCAGCAACAAGCTTTTGATTGTGTCTATGGACCCACGTGAAGGTTATCAGCTGGGCTCAGAGTACCGCGAAGCCTACTCGGATTTGCAGAAGCAAGTACAAGTACAGGGCGGGGTGTTCGAGGTTCCAGCAGTGCTGCGCCCGGTTGGGTGGGCGGACAACTACAAGGAAGAGCTTATCCTAACGTACTTACCCAGCAACCCTATGGGGCCTACTGAGGTTGGCATCAAGGAGATTGCCGGGGAGAACACCCTACGGGTTGTGCGAGGCGTACCGGATGGCACTTATGTAATCGGGAGACGTTATCGTAGTACGTTCACGCTAACTACACCTATTCTACGGGACCAGAATGACAAGCTCGTGGGGAGTGGGCATGTGCGCCTGCTGCGTCTGGACGTGGCAGTACGTAACTCCGGGCACTTCGACGTACAGGTACTAGACACCCCGCGGGACGTAAATTGGGGTGGGGAACTGACTGGTATCCTGATGAACTCAAAGGAGCTGACGCTTGGGCAGGCCCTGCGTATGGACTTGGTTACGATTACCGTACCGTGCCGCACCAACGCAGACACAACCGAGGTGTCACTATTTACTGAGGGTTCTATGGAGCTGAACGTGCTGGATATCTCGTACATCCTGCGCTACAACCAACGCAGACGGAGAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
eed1bb5b6e47e9342a323704b1d926f4a62f660a49a0800984e99533e064f2a4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3013
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage intervention for rabbit liver abscess caused by Klebsiella pneumoniae Shen,M., Zhou,X. and Li,P. 2019-04 — GenBank