Protein

View in Explore
Genbank accession
YP_009835172.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,80
Protein sequence
MIPSPFAAQGDKDPIPQTSSTGFANLRDGYTPDYEISLASNNPQAKAVERKIQNQLFFIATQNAQAWQRQMAPPWFQGMPGGYERNAEVVRVGNDGIMRRYRSMVNANASDPLSSTTWEEQPAWSVMRTNIPMPAGGPGLSSGGEVITTGRNFNDLLNGTWEFFSDSVVIASQNAPVYPASAGAAAGMLEAKSWVSGANTFCVQRYTDRVGNVAVRGLNAGAWTNWMYAVNVMALQQGRVTYGVAAGSANAYTLTLVPQLQGGLVDGMILRVKFNTMNTGASTINVSGLGAKAIVGAANFPLTGGELGQGLIAELVFDAAGDRWRILAGAPRIQVGNADQDYQAPSWKQVKDYVASQKLTEVDWTDVVNKPNVAIQDTTPWFANLELSDARPFIDFHFNSNRAKDFDYRLISEADGSLAFYSRQGSAGPTQDILFNRNSVTFFQPRLDVAKNLAYIANSGPLWQNTTADQPGWKFTFAQGVDANNNAVIAVNTTNPDGSYRSQIMRWDWASTNVIFNNRPLFAGQYTPWDSGNFDPSTKLTVNATNQIAGPTGIRNTNGNTGDMNTWGSGSTTASYGNAAIQIFGKGGGEPAAIYFDNSQTGWYLGMDKDGQLKRAGWSLGNNSYVITDESNIRTHINTMAARPIWGNVEFWGPWNFNPNTKLTLGAFNDSQYTRMVNSAAKDVGIAAMTSYGDAAMSFFNYEASTPTGNRAAVISFVRNGARGVLFGLDTDNKLKWGGYSLGAVAFEIADSNNLMSLWSSHAAAPNWNGQTIWRSGNFNPDTKATLAARNTTSSPTIFSYGASGIASTGQVGALVVENNSVTNTAAAITFHSPQKYQVNFGLDADNVVKIGGGTMGGVAYPIIHSGNYNNYINQALVQVGLGGVGSYAILAVFDTSAPAASIAPGTIMDSSKLFYSSCDSTYRSSARPTGTWRCMGYVYNRDSTNGDSASLFQRVT
Physico‐chemical
properties
protein length:957 AA
molecular weight: 102929,15570 Da
isoelectric point:6,08361
aromaticity:0,10972
hydropathy:-0,27085

Domains

Domains [InterPro]
DC_0009
ATT
1–206
DC_0009 DC_1924
cd19958
STR
147–226
cd19958 DC_1924
DC_1788
STR
162–682
DC_1788
YP_009835172.1
1 957
Architecture
ATT
STR
RBD
ATT 1-206 | STR 207-682 | RBD 683-957
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009835172.1
1 957
Domain Start End Length (AA) Confidence
N-terminal 1 394 394 0,8853
Central domain 395 600 207 0,3394
C-terminal 601 957 356 0,8188
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-394
Central
395-600
C-terminal
601-957

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage BrSP1
[NCBI] 		2029635 Uroviricota > Caudoviricetes > Lindbergviridae > Pbunavirus BrSP1 >
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009835172.1 [NCBI]
Genbank nucleotide accession
NC_048675 [NCBI]
CDS location
range 38389 -> 41262
strand +
CDS
CTGATACCCAGTCCGTTTGCTGCGCAGGGCGACAAAGACCCGATCCCGCAGACTTCTTCCACTGGCTTCGCTAACCTTCGCGACGGCTACACGCCGGACTACGAAATCAGCCTGGCGTCGAACAACCCGCAGGCCAAAGCGGTCGAGCGAAAGATTCAAAACCAACTCTTCTTCATCGCGACCCAGAATGCGCAAGCCTGGCAGCGTCAAATGGCGCCGCCGTGGTTTCAGGGTATGCCCGGTGGGTATGAACGGAACGCCGAAGTCGTGCGCGTCGGCAATGACGGAATCATGCGGCGCTATCGCTCCATGGTGAACGCCAACGCCAGCGATCCTCTCAGCAGTACCACCTGGGAAGAGCAACCCGCCTGGTCAGTTATGCGCACCAACATACCGATGCCGGCTGGCGGCCCCGGTCTGTCTTCTGGCGGAGAAGTCATCACGACCGGCCGCAACTTCAACGACCTGTTAAATGGGACGTGGGAGTTCTTCTCTGATTCAGTGGTTATCGCTTCTCAGAATGCCCCCGTATATCCGGCTTCCGCTGGTGCCGCTGCTGGCATGTTGGAGGCGAAATCTTGGGTGTCCGGAGCCAATACGTTCTGCGTCCAACGCTACACTGATCGCGTCGGGAACGTCGCTGTGCGCGGGCTTAATGCCGGAGCGTGGACCAACTGGATGTATGCGGTAAACGTCATGGCCCTTCAACAAGGTCGGGTCACCTATGGAGTCGCGGCCGGATCGGCGAACGCTTACACGTTGACGCTAGTTCCGCAGCTCCAAGGCGGCCTGGTGGATGGCATGATTCTTCGGGTCAAGTTCAACACCATGAACACCGGCGCCTCCACCATCAACGTCTCCGGACTCGGCGCCAAAGCCATCGTCGGCGCGGCCAACTTCCCTCTCACCGGCGGCGAACTTGGCCAAGGACTCATCGCTGAGCTTGTCTTCGACGCAGCAGGCGACCGCTGGAGGATTCTGGCAGGCGCGCCGCGCATCCAAGTCGGCAACGCCGATCAGGACTACCAGGCGCCGAGTTGGAAGCAAGTTAAAGACTATGTCGCGTCCCAAAAGCTCACCGAAGTGGATTGGACGGATGTCGTCAACAAGCCGAACGTTGCTATCCAAGATACAACGCCGTGGTTCGCCAATCTGGAGCTGTCCGATGCTCGGCCTTTCATCGATTTCCACTTCAACAGCAATCGCGCCAAAGATTTTGACTATCGGCTGATATCTGAAGCAGACGGATCGCTGGCTTTCTATTCGCGGCAGGGGTCTGCTGGGCCTACCCAGGACATCCTGTTCAACCGAAATTCCGTGACTTTCTTCCAGCCGCGACTCGATGTGGCGAAAAACCTCGCGTACATCGCGAACTCTGGCCCCCTTTGGCAGAACACCACCGCCGATCAGCCCGGCTGGAAGTTCACTTTCGCGCAAGGCGTGGACGCGAACAACAACGCGGTGATCGCAGTCAATACCACCAATCCTGACGGCTCCTATCGCTCACAGATAATGCGTTGGGACTGGGCGTCCACGAATGTAATCTTCAACAACCGTCCGCTCTTCGCCGGTCAATACACCCCTTGGGATTCTGGGAACTTCGATCCTTCCACCAAGTTGACGGTGAATGCCACGAACCAAATCGCCGGCCCAACCGGGATTCGGAATACCAACGGCAACACCGGCGACATGAACACCTGGGGTTCCGGCTCCACGACGGCATCCTATGGCAATGCTGCCATTCAAATCTTCGGAAAAGGGGGCGGTGAGCCTGCCGCGATCTATTTCGACAACTCCCAGACCGGATGGTATCTGGGCATGGACAAGGATGGACAGCTCAAGCGGGCCGGCTGGTCGCTCGGCAATAACTCCTATGTGATCACCGACGAATCCAACATCCGAACCCATATCAACACAATGGCTGCGCGCCCGATTTGGGGGAATGTCGAGTTCTGGGGTCCGTGGAACTTCAATCCGAACACTAAGCTTACGTTGGGCGCATTCAACGATAGCCAATACACCAGGATGGTAAACAGCGCCGCGAAGGACGTAGGGATAGCCGCCATGACAAGTTATGGCGACGCGGCTATGTCGTTCTTCAACTATGAGGCTTCGACGCCGACCGGGAATCGTGCTGCTGTAATTTCGTTTGTTCGTAACGGGGCACGAGGCGTTCTGTTCGGCCTGGACACGGACAACAAGCTGAAATGGGGCGGCTATTCTCTAGGTGCCGTCGCGTTCGAGATTGCCGACTCCAACAACCTCATGAGCCTGTGGTCATCCCACGCTGCCGCGCCGAACTGGAACGGGCAGACCATCTGGAGGTCGGGAAACTTCAACCCAGACACCAAGGCGACTTTGGCAGCTCGCAATACGACGTCATCCCCTACAATATTCAGTTATGGGGCGTCCGGAATCGCATCAACCGGACAGGTCGGTGCGTTGGTTGTGGAAAACAACAGCGTCACCAATACCGCAGCCGCCATCACGTTCCATTCGCCGCAGAAATATCAGGTCAACTTCGGCCTGGATGCGGACAACGTGGTAAAGATCGGTGGCGGCACAATGGGCGGCGTAGCATATCCCATCATCCACTCCGGCAACTACAACAACTACATCAACCAGGCGCTGGTTCAGGTAGGTCTTGGCGGCGTCGGTTCCTACGCGATCCTTGCCGTATTTGACACCTCCGCGCCGGCAGCGTCCATTGCCCCCGGAACGATCATGGACAGTTCCAAGCTGTTCTATTCGTCCTGCGATTCGACCTATCGCAGCAGCGCCCGTCCGACGGGCACCTGGCGCTGCATGGGGTATGTGTATAACCGAGACTCCACCAACGGCGACTCGGCATCCCTATTCCAGCGGGTAACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
692e72e154d54660657bdc6e8558314c460aefe229fe9e11da504ff5a749cb38
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6077
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of a Pseudomonas aeruginosa-infecting phage isolated in a water treatment utility located in Sao Paulo, Brazil Ardisson-Araujo,D.M.P., Melo,F.L., Ribeiro,B.M. and Wolff,J.L. 2019 — GenBank