Protein

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Genbank accession
ARM68528.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MLQKMTDVSTNINVSTAENGFIGANFYTEDDGSAYIRITIKDNNQVLDFNKTDMLPRLDLFCSDGSIFTNEPLDIVIPDKGVVQYKVSDNVIAHPGRMDAKLFLANKNDSIHVANFYFTITDSGTTGPIGKEIHLDSLQELVKNVMKENAVGLLDDSFKSKLETDLQTYVTENSNLFKGDPFTFDDFTPEQLQSLKGEPGKDADMTLLQPNFSEELNKLSTIKGNMTVSIVHAPSQTFHVVQPISDNRALRIWFSKNQKDDYIIFRETEIGDYKNENKSIGYQNLEMVDSSMFNTSYAPNYFATTVGATLKGTVIADKINFTSYCTNVGGIWEATLDEGTTNEKKTTVSTYSDTNKVDNEQLLFDNLEYKKHTLKLVFKGQDPDHPTTSPRGWFNFGGTRPQDVKGTINIFKLVPVVTNVTQSLYSYSNKDIAMQIRDANNTSGEQFVPEHNGIGTAFKNKDAKLLGDNKELSFVTDKVYTDIQNVSLVQNVNGRVDNNDLVNIITNHSIKNGAISVYGNVKFLKKTYVKTAYAGMVPYFTKNVNKIKSSLNNTYKPDVSGTYKIEKIPEKLQAKSYLLSNDTNDVITAFEFENIVKTNRINENAIKGDTWIEHRNADMGKIYNQQFKEETIEAGYEWQFKLNYRTTEIPYANILI
Physico‐chemical
properties
protein length:656 AA
molecular weight: 73940,04310 Da
isoelectric point:5,31180
aromaticity:0,10061
hydropathy:-0,49924

Domains

Domains [InterPro]
DC_0885
STR
1–300
DC_0885 DC_1116
G3DSA:2.60.40.3350
ATT
5–125
G3DSA:2.60.40.3350 G3DSA:2.60.120.260
IPR018913
ATT
10–146
IPR018913 G3DSA:2.60.120.260
ARM68528.1
1 656
Architecture
ATT
STR
RBD
ATT 1-146 | STR 147-389 | RBD 390-656
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ARM68528.1
1 656
Domain Start End Length (AA) Confidence
N-terminal 1 259 259 0,9953
Central domain 260 472 214 0,6497
C-terminal 473 656 183 0,4289
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-259
Central
260-472
C-terminal
473-656

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage IME1365_01
[NCBI] 		1965494 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus haemolyticus
[NCBI] 		1283 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARM68528.1 [NCBI]
Genbank nucleotide accession
KY653129.1 [NCBI]
CDS location
range 39709 -> 41679
strand +
CDS
ATGTTACAAAAAATGACAGATGTATCTACAAATATCAATGTTAGCACAGCTGAGAACGGATTTATTGGCGCTAATTTTTATACCGAAGATGACGGTAGTGCATACATTAGAATTACAATTAAAGATAATAACCAAGTTTTAGATTTTAATAAAACAGATATGTTACCTAGATTAGATCTATTCTGTTCAGATGGTTCAATATTTACGAATGAGCCATTAGATATTGTGATACCTGACAAAGGTGTTGTTCAATATAAAGTATCAGATAACGTTATTGCACATCCTGGTAGAATGGACGCAAAACTATTTTTAGCAAACAAAAACGATAGTATCCACGTAGCTAATTTCTACTTCACAATAACTGACAGTGGTACGACTGGACCTATTGGGAAAGAAATACATTTAGATTCATTGCAAGAATTAGTTAAAAATGTAATGAAAGAAAATGCAGTCGGTTTGTTGGATGATAGTTTTAAATCTAAGTTAGAAACAGACTTGCAAACATACGTTACAGAAAACTCAAATTTATTCAAAGGCGATCCTTTCACTTTCGACGACTTCACACCAGAACAACTACAATCTCTAAAAGGCGAACCCGGTAAAGATGCAGACATGACACTTTTACAACCTAATTTCTCCGAAGAATTGAATAAATTATCTACAATCAAAGGAAATATGACGGTAAGTATTGTGCATGCACCTTCACAAACATTTCACGTTGTCCAACCTATAAGTGACAATAGAGCCTTAAGAATTTGGTTCAGTAAAAATCAAAAAGATGACTACATCATTTTTCGAGAAACAGAGATAGGCGACTATAAAAATGAAAACAAATCGATAGGCTATCAAAATTTAGAAATGGTTGACAGTAGTATGTTTAATACATCTTATGCGCCTAACTATTTTGCAACTACCGTAGGTGCCACACTTAAAGGTACAGTTATTGCCGATAAAATCAATTTTACATCGTATTGTACAAATGTTGGTGGTATTTGGGAAGCTACACTTGATGAAGGAACTACAAATGAGAAGAAAACTACTGTATCAACGTATAGCGATACTAATAAAGTTGATAACGAGCAACTACTATTCGATAATTTAGAATACAAAAAACATACATTGAAATTAGTTTTTAAAGGACAAGATCCAGACCACCCAACTACATCGCCTAGAGGATGGTTTAATTTCGGTGGAACACGTCCACAAGATGTTAAAGGTACGATAAATATTTTTAAACTAGTACCAGTTGTTACAAATGTAACTCAGTCGCTTTATAGCTATTCAAATAAAGACATTGCAATGCAAATCAGAGATGCGAATAATACAAGTGGGGAACAATTTGTACCAGAACACAACGGAATAGGAACAGCTTTCAAAAATAAAGATGCTAAATTATTAGGAGACAACAAAGAATTATCATTTGTTACGGATAAAGTTTATACAGACATACAAAATGTTAGCTTGGTTCAAAATGTTAACGGTAGAGTAGACAATAACGATTTAGTAAATATCATCACAAATCACTCAATTAAAAATGGTGCAATTTCGGTATATGGAAATGTTAAGTTTTTAAAGAAAACATATGTTAAAACTGCATACGCTGGCATGGTTCCGTATTTTACTAAAAACGTTAACAAAATCAAATCATCACTGAACAACACATATAAACCAGATGTAAGTGGAACATATAAAATTGAGAAGATACCAGAAAAATTACAAGCAAAGTCATATCTATTAAGTAATGACACAAACGATGTTATTACGGCTTTTGAATTTGAAAATATTGTCAAAACAAACAGAATTAACGAAAATGCGATAAAAGGCGATACATGGATAGAACACCGCAACGCTGACATGGGCAAGATTTATAACCAACAATTCAAAGAAGAAACAATTGAAGCTGGTTATGAATGGCAATTCAAACTTAATTACAGAACGACAGAAATACCATACGCAAATATATTGATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2536c1371291b4f72770d83aa58e7409e3ff7ecc15d85f92c1d26bf2a4efd46f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7194
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of active prophages from bacterial high-throughput sequencing data Sun,Q., Zhang,X., Xing,S. and Tong,Y.-G. 2018-12-28 — GenBank