Protein

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Genbank accession
AII27480.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGFTNMINPGIFELLPTGDPNAVISATIFYENQLSSQRFMILDRLSGGVIASGKTDEQGVFTRFVGDKYVIDDALLVVGFDDTGTYNAQVADHINGVL
Physico‐chemical
properties
protein length:98 AA
molecular weight: 10604,83320 Da
isoelectric point:4,17377
aromaticity:0,10204
hydropathy:0,17143

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage B8b
[NCBI] 		1506997 Uroviricota > Caudoviricetes >
Host Pseudoalteromonas sp.
[NCBI] 		53249 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AII27480.1 [NCBI]
Genbank nucleotide accession
KJ944830.1 [NCBI]
CDS location
range 19874 -> 20170
strand -
CDS
TTGGGATTTACTAATATGATTAATCCGGGAATTTTTGAATTGTTACCTACTGGTGACCCTAACGCTGTGATAAGCGCTACTATATTTTATGAAAACCAGCTTTCTAGTCAGAGGTTTATGATACTAGATAGGCTTAGTGGCGGTGTGATAGCTAGTGGTAAGACTGACGAACAGGGTGTATTTACTCGATTTGTTGGTGATAAATATGTGATTGACGACGCGTTATTAGTCGTTGGTTTTGACGACACAGGCACGTACAATGCACAGGTTGCAGACCACATTAACGGCGTATTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
042da64edb6296c71dbb3b2f0c267cfa50466d19d1cc5c447fdf024f2287e0bc
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6680
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Life-style and genome structure of marine pseudoalteromonas siphovirus b8b isolated from the northwestern mediterranean sea Lara,E., Holmfeldt,K., Solonenko,N., Sa,E.L., Ignacio-Espinoza,J.C., Cornejo-Castillo,F.M., Verberkmoes,N.C., Vaque,D., Sullivan,M.B. and Acinas,S.G. 2015 25587991 GenBank