Protein

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Genbank accession
XOD31757.1 [GenBank]
Protein name
long-tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MEKFMAEFGQGYVQTPFLSESNSVRYKISIAGSCPLSTAGPYVKFQDNPVGNQTFSAGLHLRVFDPSTGALVDSKSYAFSASNNTASAAFVSFMNSLSNNRLVAILTSGKVNFPPEVVSWLRAAGTSAFPSDSVLSRFDVSYAAFYTSSKRAIALEHVKLSNIKITDDYQTILDVVFDSLEDVGATGFPKRTYESVEQFMSAIGGTNN
Physico‐chemical
properties
protein length:208 AA
molecular weight: 22485,91940 Da
isoelectric point:5,66733
aromaticity:0,12019
hydropathy:-0,03125

Domains

Domains [InterPro]
DC_0083
STR
1–208
DC_0083
PS52031
LEC
22–192
PS52031
IPR039477
STR
58–125
IPR039477
XOD31757.1
1 208
Architecture
STR
STR 1-208
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage sb1
[NCBI] 		3387546 Viruses >
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD31757.1 [NCBI]
Genbank nucleotide accession
PQ666539.1 [NCBI]
CDS location
range 155485 -> 156111
strand +
CDS
ATGGAAAAATTTATGGCAGAGTTTGGACAAGGATATGTCCAAACTCCATTTTTATCGGAAAGCAATTCAGTAAGATATAAAATAAGTATAGCGGGTTCTTGCCCGCTTTCTACTGCAGGTCCATATGTTAAATTTCAGGATAATCCCGTTGGAAACCAAACATTTAGTGCGGGTCTTCATTTAAGAGTTTTTGACCCTTCTACAGGAGCATTAGTTGATAGTAAGTCATATGCTTTTTCTGCTTCAAACAATACAGCATCTGCCGCTTTTGTCAGTTTTATGAATTCTTTGTCAAACAACAGACTTGTTGCTATATTAACTAGCGGAAAGGTTAATTTTCCTCCTGAAGTAGTATCTTGGCTAAGAGCTGCAGGAACATCTGCTTTTCCATCTGATTCTGTACTGTCAAGATTTGACGTATCATATGCTGCTTTTTACACTTCTTCTAAAAGAGCTATTGCATTAGAGCATGTTAAACTAAGTAATATAAAAATCACAGATGATTATCAAACTATTTTAGATGTTGTATTTGACAGTTTAGAGGACGTCGGAGCTACGGGATTTCCTAAAAGAACATATGAAAGTGTCGAGCAATTTATGTCAGCTATTGGTGGAACTAACAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
63e6794c17df62f355c68cb61239999ea6a9da23cca6b960ffcab1bfc388e1f6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7423
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50