Protein

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Genbank accession
WDS62552.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,58
Protein sequence
MTIVYGGNLGLMSGGAKGEEHYDPLMNFMRGLDALVQPRVRSIVSSLPTSGMADGDVYVYTGADANQNKLARYSVVLAGWEYFTPKNGWEVRVLDQLDGNGQYKIFGFKGGAWTEQLSTGGLTIAEGDARYEKLLKHNLTATTDPTSADDASQGYSILSKWLNTTTKELYFCVDTTAGAAKWEQATLTIDDLGTAAMSNVGSSANNLPTVSTVQSLISGQPVFVPSDASGPGVKGLVPAPPATEVKRFLANDGTWALITQEDIDPASGENLGNGAAVYLQTVGNVLQFKTLVSTDGSVSITVSEGTLDFSATGSVAFKTLQQAGSGGVALLSAPNTTTLSAKQLKAGNNVTLQDQSGVITINATGGSSGGGNVEPVVTEYELFYGVSGNSVPNNNAILSVTEAQALGVSATFTDLGNGRFEFKDPVNTPDALIWGVYLKIKLPDYPVQYLMDVESFALSGSSQTNVALNVASSLDKDPSKYGWVAINNNKPFPWKAGDLMNDRDTKFYDMVGPGGDYLGGTQMQSVVFGLYHIPTGNPEPIPLVPYTLPGLDTTAARGNIGSLRIRAKFEIPGPPVNDGFIPTGQLLPSSQYPALAMRSNQTFGDLFNFALLEKVPDVGANAGTQAQMIAYASSFSYISNGTTTYYDCVVGYGDPGGDAFADQRQMAWVRVQGDTGPWVAKNLDPAGDRLNSAIVQVEEFQQRLVLVRDDQGRLYSSANALDSITPIDLPDVQSGTEFMVGSLPSGNYAPHSLAGFADGTSKLVWRDMDENGNVLGWQASNATPPEAGQFIGCAFGSGRHLAINNDGKIWVTTDFGQTWAEYAYQLPLNNGNPYFLRAIQGSDNGFVIWADNDIHFVMNYDESAGWKGPFRIRTTVEVNPAAFRLSGSSLIVAAQVFPASPPTYSALFIRQNIFSGTESGPASWKQSYMTFVNNERLYLAEYGGQPVVITDNEMAPYEPALWRSTSNTDGWLYIPPYEAQEGYEAVVRAY
Physico‐chemical
properties
protein length:990 AA
molecular weight: 106013,92330 Da
isoelectric point:4,53140
aromaticity:0,10303
hydropathy:-0,18283

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDS62552.1
1 990
Domain Start End Length (AA) Confidence
N-terminal 1 415 415 0,9517
Central domain 416 625 211 0,5139
C-terminal 626 990 364 0,2434
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-415
Central
416-625
C-terminal
626-990

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage UF_RH6
[NCBI] 		3028120 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS62552.1 [NCBI]
Genbank nucleotide accession
OQ383211 [NCBI]
CDS location
range 87148 -> 90120
strand -
CDS
ATGACTATTGTTTATGGCGGTAACCTGGGGCTGATGTCCGGCGGTGCCAAGGGTGAAGAACACTACGATCCTCTGATGAACTTCATGCGAGGCCTAGATGCTTTGGTTCAGCCTCGGGTACGCAGTATTGTCTCTTCCCTGCCGACTTCCGGTATGGCGGATGGTGACGTATACGTTTACACCGGGGCCGACGCCAACCAGAACAAGCTAGCGCGCTACAGCGTTGTTCTCGCTGGGTGGGAGTATTTCACCCCTAAAAATGGCTGGGAGGTTCGAGTTCTGGACCAACTGGATGGTAACGGGCAATACAAAATCTTCGGGTTCAAAGGAGGAGCCTGGACCGAACAGTTATCCACGGGGGGACTCACTATCGCAGAGGGTGATGCGCGTTACGAAAAGTTGCTGAAGCATAACCTCACGGCCACCACGGACCCGACCTCGGCGGACGATGCCTCGCAGGGCTATTCGATTCTTAGCAAATGGTTGAACACCACCACCAAGGAGCTGTACTTCTGCGTAGACACTACGGCGGGTGCGGCTAAGTGGGAGCAGGCCACTCTCACTATCGACGATCTGGGGACTGCGGCGATGTCCAATGTTGGCAGCTCCGCGAATAACCTGCCCACCGTCAGCACCGTGCAAAGTCTGATAAGCGGTCAGCCAGTTTTCGTTCCCTCCGACGCTAGTGGACCTGGGGTGAAAGGCCTAGTACCCGCGCCGCCGGCTACTGAAGTGAAGCGATTTCTCGCTAATGACGGGACCTGGGCACTGATCACGCAAGAGGATATTGACCCTGCTAGCGGCGAGAACTTGGGCAACGGTGCCGCCGTTTACCTACAAACCGTTGGTAACGTCCTTCAGTTCAAAACCCTGGTCTCTACCGATGGTAGCGTTAGCATTACGGTGAGTGAGGGCACCCTTGACTTTTCCGCTACTGGTTCGGTGGCATTCAAGACGCTCCAGCAGGCGGGCAGCGGCGGGGTAGCCTTACTCTCGGCGCCGAACACCACTACTCTGTCTGCGAAACAACTGAAGGCAGGCAACAACGTTACGCTTCAGGACCAGTCCGGGGTGATCACTATCAACGCGACTGGAGGCAGCAGCGGGGGCGGAAACGTCGAACCTGTAGTTACCGAGTACGAGCTGTTCTACGGCGTTAGCGGTAACTCCGTACCTAACAACAATGCCATTCTTTCCGTCACTGAGGCTCAAGCCCTAGGCGTGTCTGCCACCTTCACCGATCTCGGTAATGGCCGCTTCGAATTCAAGGACCCGGTAAATACTCCGGATGCGTTGATCTGGGGCGTTTACCTAAAGATCAAACTTCCAGACTATCCAGTGCAGTACCTGATGGACGTTGAATCTTTTGCGCTGTCGGGCTCTTCGCAAACTAACGTAGCACTCAACGTAGCTAGCTCTCTGGACAAGGACCCGAGCAAGTACGGCTGGGTAGCCATCAACAACAATAAGCCTTTCCCGTGGAAAGCCGGCGACCTCATGAACGACCGAGATACCAAGTTCTACGATATGGTCGGGCCCGGCGGAGACTATCTAGGCGGCACCCAGATGCAGTCGGTAGTGTTCGGCCTGTACCACATACCCACTGGTAATCCAGAGCCTATCCCTTTGGTGCCTTACACCCTGCCGGGTTTGGATACTACAGCAGCGCGCGGAAATATCGGCAGTCTGCGTATCCGGGCCAAGTTCGAAATCCCTGGGCCGCCGGTAAACGATGGGTTCATTCCCACCGGCCAACTTCTGCCGTCTTCGCAATATCCGGCTCTAGCTATGCGCAGTAACCAAACGTTTGGTGATCTCTTCAACTTTGCGCTGTTGGAGAAAGTCCCAGACGTGGGAGCTAACGCCGGCACTCAAGCACAAATGATCGCCTACGCCTCATCGTTTTCCTACATCTCCAACGGGACCACTACGTATTATGATTGTGTGGTCGGGTATGGCGATCCGGGCGGCGATGCATTCGCTGATCAACGGCAAATGGCCTGGGTACGTGTGCAGGGCGATACTGGGCCGTGGGTAGCGAAAAACTTGGACCCGGCGGGTGATCGTTTGAACTCCGCGATTGTGCAGGTTGAAGAATTTCAACAACGTCTGGTACTGGTACGCGACGATCAGGGGCGCTTGTACAGTTCCGCCAATGCTCTGGACTCCATCACTCCGATAGACCTTCCGGATGTGCAATCCGGCACCGAGTTTATGGTCGGCTCTCTTCCTTCCGGCAACTACGCTCCGCACTCTCTTGCGGGGTTCGCAGACGGGACTTCGAAACTCGTATGGCGGGACATGGACGAAAACGGAAATGTGTTGGGTTGGCAGGCTAGCAACGCCACGCCGCCGGAGGCCGGTCAATTTATTGGTTGCGCGTTCGGTAGTGGCCGCCACTTGGCAATAAATAACGATGGCAAGATTTGGGTAACCACGGATTTCGGGCAGACCTGGGCCGAGTATGCCTACCAACTGCCGCTAAATAACGGTAACCCGTACTTCCTTCGTGCGATCCAAGGAAGCGATAACGGCTTCGTCATTTGGGCAGACAACGATATTCATTTTGTTATGAACTACGACGAGTCCGCTGGATGGAAAGGCCCGTTCCGCATCCGTACTACTGTCGAGGTGAACCCTGCGGCTTTCAGGCTCTCCGGTTCGTCCCTGATAGTAGCCGCGCAGGTATTCCCCGCGTCTCCCCCGACTTACTCTGCTCTTTTCATTCGTCAGAACATTTTCTCGGGTACAGAGTCTGGCCCTGCCTCGTGGAAACAGAGCTACATGACTTTCGTGAATAACGAGCGTCTGTATCTTGCGGAATACGGAGGTCAGCCCGTAGTGATTACCGACAACGAAATGGCGCCGTACGAGCCTGCACTCTGGCGCAGCACGAGTAACACCGATGGATGGTTGTACATCCCGCCGTACGAGGCTCAGGAAGGGTATGAAGCTGTAGTTCGTGCATACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
38d6ef54366c8763cce1c7112f0bc405410e21fc3e80042fcbc32021381a5777
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5467
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequencing of the Novel Pseudomonas aeruginosa phage UF_RH6 Hashemi Shahraki,A., Vahed,M. and Mirsaeidi,M. 2023-06-20 — GenBank