Protein

View in Explore
Genbank accession
YAF83048.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANTYDLYVGDGTTKRFAANFTKYYWTTIQVYLDGVSTPTGWVYDTVTTEVVFDTAPGAGVRIRLQRYTPLELLHVFGSGAAFTGNNVDENFQHDLTAMEETQDINGLVDYVLGDNLDANGHLIRNVGSPELPGDAANKAYVDGAVAAEAQIRQTADIDIRTEMGYGLGKTLRTNYSQNPITSDASFNANKVVVTTNTGQFALVNLDDATRTDLAADLATESNPGGAGLIGHKGRTLAEILDTLQVKISAMTSNGMYSAWAQGKVFSHQNRAYCLYNVGASHSSAPLSVYQQISEDGVSWTRPAPRVAPTDSDLVTWPQGVSAWGAGSDGTNIWLAARFRHVSDESQSKCVLYKSTTNGSSYVPVLDPVPLYDSTGKCPVLMHSFAVMPTGDLAFGYHMYDGEVGIVTINPTTYAITRHIMFTSAAMGNTPILVEPTIRMYGSRAVGFLRTQDANAHPAVMWYSDDSCQTFQIRNIDGVPNQSPITSASYDGKTYIFYCGRYRDGNTTNANTNSPVLTMRVGTDSDAYNMLWENFDVVPLAAVPSIYNNLGASGTGVQDVCVRGSKIVVCLSANTGANIDQAEMYSVTLDLGVPRQSAFFRSEEAFTNAQRATDSATSIVYNKIDVINMGQAIATIRMNGQVVIQDQATAVRWGSTTGAAAKLHAFNNGTAPAYLSANASSDSVLLWGSTGVTEVRAGTALSKAAILLDSSTKAITLTNPSNGGGVGLTANGQVTASVNWQHPWRWDGGSGGQSYLWVSGTNNIMLKKGSAPTSDSDGSLLVPATVSPRTVAVASLGTGVGREIAYATNGRKAGEGAGAGTGVPVYYDGSVWRTFYDNSVVAA
Physico‐chemical
properties
protein length:843 AA
molecular weight: 89720,80300 Da
isoelectric point:5,18641
aromaticity:0,08897
hydropathy:-0,14864

Domains

Domains [InterPro]
DC_1263
ATT
1–304
DC_1263 DC_2182
G3DSA:2.120.10.10
STR
244–571
G3DSA:2.120.10.10
IPR024428
ENZ
249–499
IPR024428
YAF83048.1
1 843
Architecture
ATT
STR
RBD
ATT 1-304 | STR 305-571 | RBD 572-843
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAF83048.1
1 843
Domain Start End Length (AA) Confidence
N-terminal 1 223 223 0,9864
Central domain 224 429 207 0,6730
C-terminal 430 843 413 0,7323
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-223
Central
224-429
C-terminal
430-843

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaP_10b1
[NCBI] 		3459931 Viruses >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAF83048.1 [NCBI]
Genbank nucleotide accession
PX000100.1 [NCBI]
CDS location
range 39953 -> 42484
strand +
CDS
ATGGCTAATACTTACGACCTGTACGTGGGCGATGGCACCACTAAAAGGTTTGCCGCGAACTTCACCAAGTATTACTGGACTACGATTCAGGTTTACTTGGACGGTGTGAGCACCCCTACCGGTTGGGTATATGACACAGTCACTACTGAGGTTGTGTTCGATACTGCCCCCGGTGCTGGGGTGCGTATCCGCCTGCAGCGGTACACCCCGCTTGAACTACTGCACGTGTTTGGTTCCGGTGCTGCGTTCACCGGAAACAACGTGGACGAGAACTTCCAGCACGACCTGACAGCAATGGAAGAAACACAGGACATTAACGGTCTTGTGGATTACGTGCTGGGCGATAATCTGGATGCGAACGGCCACCTGATTCGCAACGTCGGTAGCCCAGAGCTGCCGGGCGACGCTGCCAACAAAGCCTACGTCGACGGCGCTGTCGCGGCAGAGGCACAGATTAGGCAGACCGCCGACATCGACATCCGCACCGAGATGGGGTATGGGCTGGGCAAAACGCTCCGCACCAACTACTCGCAGAATCCAATCACCAGCGATGCGTCGTTCAACGCCAATAAGGTAGTGGTCACGACCAATACCGGGCAGTTCGCGCTGGTGAATCTGGATGACGCCACACGCACCGATTTGGCTGCGGACTTGGCTACCGAGAGTAACCCCGGCGGTGCTGGCCTTATTGGCCACAAAGGCCGCACGCTGGCCGAGATTCTGGATACCTTGCAGGTTAAAATCTCCGCCATGACCAGCAACGGCATGTACTCTGCGTGGGCACAGGGCAAGGTGTTCAGCCACCAGAACAGGGCGTACTGCCTGTACAACGTAGGTGCGTCGCACTCCAGTGCACCGCTGTCCGTGTACCAGCAGATTTCCGAGGATGGTGTGTCTTGGACTCGCCCTGCGCCGCGAGTTGCACCGACAGACTCTGACTTGGTGACTTGGCCACAGGGTGTGTCTGCGTGGGGTGCAGGCTCTGACGGCACCAACATCTGGCTTGCAGCACGTTTCAGACATGTGTCTGACGAATCCCAGAGCAAGTGCGTGCTGTACAAGAGCACCACCAATGGCTCGTCCTACGTACCTGTGCTCGACCCAGTGCCGCTGTATGACTCCACTGGCAAGTGCCCAGTGCTGATGCACAGCTTCGCCGTGATGCCTACTGGCGATCTCGCCTTCGGCTACCATATGTACGACGGGGAAGTGGGTATTGTTACCATCAACCCAACTACGTATGCCATTACCCGACACATCATGTTCACGTCGGCGGCGATGGGTAATACGCCTATTCTGGTTGAGCCAACCATTCGCATGTATGGTTCGCGCGCCGTAGGCTTCCTGCGCACGCAAGACGCCAATGCGCACCCTGCGGTGATGTGGTACAGCGATGATAGCTGCCAGACGTTCCAGATTCGCAACATCGACGGGGTGCCTAACCAGTCCCCTATCACCTCCGCATCCTATGACGGCAAGACGTACATCTTTTACTGCGGTCGCTACCGTGACGGTAATACCACCAACGCCAACACGAATAGCCCAGTGCTGACCATGCGCGTAGGTACGGACAGCGACGCCTACAACATGCTGTGGGAGAACTTCGACGTAGTGCCGCTGGCTGCTGTGCCAAGCATCTACAACAACTTGGGCGCGTCTGGTACGGGCGTGCAGGATGTGTGTGTGCGCGGCTCCAAGATTGTGGTGTGTTTGTCGGCGAACACCGGTGCGAACATCGACCAAGCCGAGATGTACAGCGTCACCCTTGACCTTGGCGTACCGCGTCAGTCTGCGTTCTTCCGTTCGGAGGAGGCATTCACAAACGCCCAGCGCGCCACAGACTCTGCCACCTCGATCGTGTACAACAAGATTGACGTGATAAACATGGGGCAGGCCATTGCCACCATTCGTATGAATGGGCAAGTGGTCATCCAAGACCAAGCCACAGCGGTTCGCTGGGGTTCCACTACCGGTGCTGCGGCTAAGCTGCATGCGTTCAATAACGGCACAGCACCTGCTTATCTGTCGGCTAATGCCAGCAGCGACAGTGTGCTGCTGTGGGGTAGCACCGGCGTCACAGAGGTTCGTGCAGGTACTGCACTATCCAAGGCGGCTATCCTGCTGGACTCCAGCACCAAGGCCATTACGCTTACCAACCCGTCTAACGGCGGCGGCGTGGGGCTGACTGCCAACGGTCAAGTCACAGCCAGCGTTAACTGGCAGCACCCTTGGAGATGGGATGGCGGCTCCGGCGGCCAGAGCTATCTATGGGTGAGCGGCACCAACAACATCATGCTGAAGAAAGGCTCTGCGCCTACTTCCGACAGCGATGGTTCACTACTGGTTCCGGCTACCGTGTCTCCGCGCACTGTGGCAGTGGCCAGTTTGGGTACTGGTGTCGGCCGGGAGATTGCCTACGCCACCAACGGCCGCAAGGCTGGTGAGGGTGCCGGTGCCGGTACTGGCGTGCCTGTGTACTACGACGGCTCTGTGTGGCGCACATTCTACGACAACTCGGTAGTGGCAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b040032b858dae3a32eb4990012233bcca1116888f767a2a686357d3ce945185
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7294
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of novel bacteriophages infecting clinical isolates of Serratia spp. and therapeutic efficacy in a Galleria mellonella model of infection Negus,D., Horton,M. and Hoyles,L. 2026-01-09 — GenBank