Protein

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Genbank accession
CAH1093800.1 [GenBank]
Protein name
inner membrane transport protein YfaV
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MDFEKDVIRTVTFKLIPALVILYLVAYIDRAAVGFAHLHMGADVGIGDAAYGLGAGLFFIGYFLFEVPSNLLLDKFGARKWFTRILLTWGLITMAMALIQGPKSFYLLRFLLGVAEAGFFPGVLYLITQWYPVRHRGKIMGMFVLSQPIAMMIAGPLAGLLLGMDGIANLHGWQWLFVAVGLPAVLLALPTFLWLPDNIEKVKWLSIEQKQWLKNELVKDEAEYDQTRHANPLHALKDKRVLLLALYYLPVTLSIYGLNLWLPTIIKQFGGGSDIQIGFLSSIPYIFGIIGLLIIPRSTDRLNDRYGHLSFLYALGACAMFLSGWLNSPVMQLAALAVVAFCLFSSTAVFWTLPGRFLTGASAAAGIALINSVGNLGGYVGPFGIGLLKEYTGNMAAGLYFLSIVMLFGLILTYIVYAKLERQKTQTVNIQKPL
Physico‐chemical
properties
protein length:434 AA
molecular weight: 47944,49030 Da
isoelectric point:9,25974
aromaticity:0,13364
hydropathy:0,66774

Domains

Domains [InterPro]
PTHR43791
Unmapped
4–423
PTHR43791
G3DSA:1.20.1250.20:FF:000018
Unmapped
5–210
G3DSA:1.20.1250.20:FF:000018 IPR036259
IPR036259
STR
5–211
IPR036259
IPR036259
STR
9–422
IPR036259
cd17319
STR
12–416
cd17319
IPR020846
STR
15–421
IPR020846
IPR011701
STR
19–382
IPR011701
cd17319
STR
20–410
cd17319
CAH1093800.1
1 434
Architecture
STR
STR 5-433 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAH1093800.1
1 434
Domain Start End Length (AA) Confidence
N-terminal 1 203 203 0,2475
Central domain 204 402 200 0,4537
C-terminal 403 434 31 0,9767
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-203
Central
204-402
C-terminal
403-434

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage MD-2021a
[NCBI] 		2899278 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAH1093800.1 [NCBI]
Genbank nucleotide accession
CAKLQH020000027 [NCBI]
CDS location
range 13459 -> 14763
strand +
CDS
ATGGATTTCGAAAAGGATGTAATACGGACGGTCACGTTTAAGCTGATACCTGCATTAGTCATACTATATCTGGTGGCATACATTGATCGGGCCGCTGTCGGATTTGCCCATTTGCATATGGGGGCCGATGTAGGAATTGGTGATGCTGCCTATGGTCTAGGAGCTGGCTTATTTTTTATTGGATATTTTCTTTTTGAAGTTCCAAGTAATTTGCTTTTAGACAAATTTGGTGCTCGTAAATGGTTTACCCGCATTTTATTAACATGGGGCCTCATCACCATGGCCATGGCGCTTATTCAAGGCCCTAAAAGTTTTTATCTCTTACGGTTTTTACTCGGTGTAGCAGAGGCGGGTTTTTTCCCTGGTGTTTTATACCTAATTACGCAGTGGTATCCGGTGCGGCATCGCGGAAAAATCATGGGAATGTTTGTGCTTTCACAACCGATTGCCATGATGATTGCAGGGCCTTTAGCTGGTCTATTACTTGGAATGGATGGCATTGCAAATTTACACGGCTGGCAATGGTTGTTTGTTGCAGTTGGCTTGCCCGCAGTTTTATTGGCTTTACCTACATTTTTGTGGCTGCCCGATAACATTGAAAAAGTGAAATGGTTAAGCATTGAACAAAAACAATGGCTTAAAAATGAACTCGTTAAAGATGAAGCCGAATATGACCAAACCCGACATGCCAATCCACTACATGCTTTAAAAGACAAACGCGTACTTTTATTAGCACTTTACTACTTACCGGTAACGTTAAGTATTTATGGTTTAAATCTCTGGCTTCCTACCATTATTAAGCAATTTGGCGGAGGTAGTGATATTCAAATTGGGTTCTTATCTAGCATTCCCTATATTTTTGGAATTATTGGACTTCTCATTATTCCGCGTAGTACTGACCGCCTAAACGATCGTTATGGACACTTAAGTTTTCTGTATGCACTAGGTGCTTGTGCAATGTTTTTAAGTGGTTGGCTAAATTCTCCAGTTATGCAGTTGGCAGCTTTGGCTGTAGTTGCGTTCTGTCTATTTTCATCGACTGCCGTGTTTTGGACACTACCGGGTCGTTTCTTAACGGGTGCAAGTGCAGCAGCTGGTATTGCCTTAATTAACTCTGTTGGAAATTTAGGTGGCTATGTCGGTCCATTTGGGATCGGACTTTTAAAAGAATACACGGGAAATATGGCTGCTGGTTTGTATTTCTTATCTATCGTCATGCTTTTTGGCTTGATTTTGACCTACATCGTCTATGCCAAGCTCGAACGTCAAAAAACACAAACAGTGAATATTCAAAAGCCTTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3018259be203ae807147edcc8b4542c1546fccd3b67f4aad05088fbe65ea5670
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9493
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50