Protein

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Genbank accession
YAL64474.1 [GenBank]
Protein name
putative baseplate wedge protein
RBP type
TSP
Evidence DepoScope
Probability 0,80
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MKILKKLTPYAKMSLVLGKTEKYEKGQVDIDDNVANEVYNSMIATIKLDQTDVEVVALRNNYVVDRVYPQYEPDSDETFHVTVDDKVYICLSNNNGAISTSPPSGSLLNNIIKSDGYVWAYIGKLNDKDVSSSLSKFITIPTSEYSSNEIGCIARINAVKSTTTNFDTTPLYKVITKTGSNAIFDISLNESGDINYISCANGGFGYRENDYLVISDNFNGTGAEVNLKVNQNGGIELVDFSNGSGYNDCSILVIGDGTGASLEYATLNGSVTDVTVKNEGSNYTWAKAFVFSSDRAIIANLQLLPMNGKATSPSILLRANTWRIKKSIDSNNYDGYIYNNMEFNYLAVTDQYTNAQVLAGLNNKYNGNIQLKYATEVKEVYSFNKTDSIVVTEDEKINLIITIKVDG
Physico‐chemical
properties
protein length:407 AA
molecular weight: 44786,52470 Da
isoelectric point:4,70760
aromaticity:0,09582
hydropathy:-0,26167

Domains

Domains [InterPro]
IPR036327
STR
15–213
IPR036327
DC_0155
STR
32–402
DC_0155
YAL64474.1
1 407
Architecture
STR
STR 15-402 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAL64474.1
1 407
Domain Start End Length (AA) Confidence
N-terminal 1 311 311 0,8871
Central domain 312 396 86 0,4172
C-terminal 397 407 10 0,9886
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-311
Central
312-396
C-terminal
397-407

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage AbIJP1
[NCBI] 		3411817 No lineage information
Host Acinetobacter sp.
[NCBI] 		472 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAL64474.1 [NCBI]
Genbank nucleotide accession
PV126534 [NCBI]
CDS location
range 339023 -> 340246
strand -
CDS
ATGAAAATATTAAAAAAATTAACACCTTATGCTAAAATGTCACTAGTTTTAGGCAAAACAGAAAAATATGAAAAAGGTCAAGTTGACATTGATGATAATGTAGCAAATGAAGTTTATAATTCAATGATTGCAACTATTAAATTAGATCAAACTGATGTTGAAGTAGTTGCATTAAGAAATAATTATGTTGTTGATCGTGTTTATCCACAATATGAACCTGATTCTGATGAAACTTTTCATGTGACTGTTGATGATAAAGTATACATTTGTTTATCTAATAACAACGGCGCAATTAGTACTTCACCACCTTCAGGAAGTTTACTAAATAATATAATTAAATCTGATGGTTATGTTTGGGCGTACATTGGTAAATTGAATGATAAAGATGTTAGTTCATCTTTAAGTAAGTTTATTACGATTCCAACAAGTGAATATTCTAGTAATGAAATTGGTTGCATTGCACGTATAAATGCTGTAAAATCTACCACAACAAATTTTGATACAACACCTTTATATAAGGTTATTACTAAGACGGGTTCAAATGCAATATTTGATATTTCGTTAAATGAATCAGGTGATATTAATTATATTTCATGTGCAAACGGCGGTTTTGGTTATCGTGAAAATGATTACTTGGTTATAAGTGATAACTTTAATGGGACAGGTGCTGAAGTAAATTTAAAAGTAAATCAAAATGGTGGTATTGAATTAGTTGATTTTTCAAATGGTTCAGGCTATAATGATTGCTCAATTTTGGTAATTGGTGACGGTACAGGTGCATCATTAGAGTATGCAACTTTAAATGGTAGCGTAACTGATGTAACGGTAAAAAATGAAGGTAGTAATTATACATGGGCGAAAGCTTTTGTATTTTCTTCAGATCGTGCCATTATTGCAAATTTACAATTATTACCTATGAATGGTAAAGCAACTAGTCCAAGTATTTTATTACGTGCTAATACGTGGCGCATTAAGAAAAGTATAGATTCTAATAATTATGATGGTTATATTTATAATAATATGGAATTTAATTATCTAGCTGTTACTGATCAATATACAAATGCTCAAGTTCTAGCAGGACTAAATAATAAGTATAATGGAAATATTCAATTAAAGTATGCAACTGAAGTTAAAGAAGTTTATTCTTTTAATAAAACTGATAGTATCGTTGTAACTGAAGATGAAAAAATAAATTTAATAATAACTATTAAAGTGGATGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
943837468044333060af0cf965064cf8c4cb34bc33da59fb9c063e423c5ead84
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7571
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50