Protein

View in Explore
Genbank accession
QIG66711.1 [GenBank]
Protein name
SGNH hydrolase-type protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MSQRVLGDVPGNVITMGGTSFVGHPLLGGQPKWVRRLAHTLYGAGYNSGAAPLTGDGTAKTMAVNNYVNLSGAPINVASVVFQGWTLRTTGTTDASASYTVTGGIEYPVGTQIGTYSVTVNPGQNNFSTDVTLSTPIPAGATFRVTGSATPANAATYIANLGFAGLRTYQKSTLLKKLALAAFGDSIFTNNNGAIINAASSRCPAYLASITGTTAATYGASSAANFAKQADLANVLGCTHVVTNFGTNDFGASTVLATLQGYLTSMRDMVRGLGMKFVQATMLVRTKSTSTAVTMTSVGASSNIITATVPDASKFKVGAAYIIAGATETEYNGTKVCVARNTGSNTVSFQFTQGANAVATGTITVTPWKVTMDIGFQEVYSSFYAAGGSSPRGLFNAWVRGGAFDDYIETADPFEPSRDAGRWKVGGEDASLPDYQLATVTSLVSTSRFVSNYSRGNATIPNGVVQPASGANVGQLKGGSNNTGGDITAVSAFTSAFTVGDTVHCVPGVSYCSDDGTHPRVAGGAFGAQPLLDNAIAAWIDARV
Physico‐chemical
properties
protein length:544 AA
molecular weight: 55884,81270 Da
isoelectric point:8,66231
aromaticity:0,08824
hydropathy:0,06544

Domains

Domains [InterPro]
SSF52266
STR
177–290
SSF52266
QIG66711.1
1 544
Architecture
STR
STR 177-290 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM16
[NCBI] 		2509755 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG66711.1 [NCBI]
Genbank nucleotide accession
MN988459 [NCBI]
CDS location
range 34380 -> 36014
strand +
CDS
ATGTCACAGCGGGTACTGGGCGACGTCCCCGGAAACGTCATCACCATGGGCGGAACCTCCTTTGTCGGCCATCCACTGCTGGGCGGTCAGCCGAAATGGGTCCGCCGTCTGGCTCACACGCTCTACGGCGCTGGCTACAACTCGGGCGCGGCTCCCCTCACCGGGGACGGCACCGCCAAGACGATGGCCGTCAACAACTACGTCAACCTGTCAGGGGCTCCGATCAACGTGGCCTCTGTGGTGTTTCAGGGTTGGACCCTGCGCACGACGGGGACGACCGACGCCTCGGCATCCTACACGGTCACGGGCGGCATCGAGTATCCAGTCGGCACACAGATCGGCACCTACTCGGTCACCGTCAACCCGGGGCAGAACAACTTCTCCACCGACGTGACGCTCTCGACGCCGATCCCGGCAGGGGCGACCTTCCGTGTCACCGGATCGGCCACCCCGGCGAACGCCGCGACCTACATCGCCAACCTCGGCTTTGCCGGTCTGCGCACCTACCAGAAGAGCACGCTGCTGAAGAAGCTGGCGCTGGCTGCCTTCGGGGACAGCATCTTCACCAACAACAACGGCGCGATCATCAACGCCGCGTCAAGCCGCTGCCCTGCCTATCTGGCGTCGATCACCGGTACCACGGCGGCGACCTATGGGGCCTCCTCTGCGGCGAACTTCGCCAAGCAGGCGGACCTCGCCAACGTCCTCGGCTGCACCCACGTCGTCACCAACTTCGGCACCAACGACTTCGGCGCGTCCACCGTCCTCGCCACGCTGCAGGGCTACCTGACCAGCATGCGCGACATGGTGCGTGGCCTCGGGATGAAGTTCGTGCAGGCGACGATGCTGGTCCGTACCAAATCGACCAGCACCGCCGTCACCATGACCTCGGTCGGTGCCTCCAGCAACATTATCACCGCCACCGTTCCCGACGCCTCGAAGTTCAAGGTCGGCGCGGCCTACATCATCGCCGGGGCCACCGAAACCGAATACAACGGTACCAAGGTCTGCGTCGCCCGTAACACCGGTAGCAACACCGTCTCGTTCCAATTCACCCAAGGCGCGAACGCCGTCGCCACCGGCACCATCACGGTCACCCCGTGGAAGGTGACGATGGACATCGGCTTTCAGGAAGTCTACTCCAGCTTCTACGCGGCTGGCGGCTCCAGCCCTCGCGGCCTGTTCAACGCATGGGTGCGTGGCGGGGCCTTTGACGACTACATCGAGACGGCCGATCCCTTCGAACCGTCGCGGGACGCGGGGCGCTGGAAGGTCGGCGGAGAAGACGCCTCTCTGCCGGATTACCAGTTGGCCACGGTCACCTCGCTGGTCTCGACCTCGCGCTTCGTCTCCAACTACTCACGCGGTAACGCCACCATTCCGAACGGTGTCGTGCAGCCAGCATCCGGCGCGAACGTCGGTCAGTTGAAGGGCGGCTCGAACAACACGGGCGGCGACATCACCGCCGTATCGGCCTTCACCTCGGCCTTCACGGTCGGGGACACGGTGCACTGCGTTCCCGGTGTATCCTACTGCTCTGATGACGGGACGCACCCCCGCGTAGCCGGTGGCGCATTTGGTGCCCAACCACTGCTGGACAACGCCATCGCCGCATGGATCGACGCCCGGGTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1c9e579b3b0c1783ad9be1eab1693ba9aca94d511ce5d007965d6cfc19e7749d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6531
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank