Protein

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Genbank accession
AXF41546.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MEGEIASFFATKEQLSAGLVKKADLGDDNKLVSSQLPDFISQHIQEVNLKLSQVDLALTNNLQTAKDYAEAYTDDVAARKADLVEGKVPTNQLPSLGSYPEFETALNDVANEARHDMVTRTDQLERSKATLGEDGKIIQEQLPSYDKIPDLSPVIQDLYDSKADKTNVYTKSETLSADGIAALLENKTYTRDKLDEKLDLVRVTNENYWEDKFLKIGGYPFGAVIRLDNNTGEVYSTVNGNKKNPNVDMTGWKFKTTNSELVEWNGITAKSYFDIRSKLIVLPEMFGDDIILASDYAVANNGILLTSEKVYEVNQEFKPKSGLVWFSNNSTLKQVGAASQSASASGLAPESNVRIIGTLTVDMGNPTVGWGEKCHVRIDSFTNREPQISGFYFDTLILKGGHFNCNGFVMAGGANLVRGKRIECGDSAVIGRVFMAHWGNFQDHYNDNGTYRHKVGWLPTTHPHDCIIEEISAGNLTCDTNDYSGVVLISAGYDIKIGKIEGSILDHTITGKGLLFLTAGDLGFAYANEKDKRNRMRNIQVGSIQGTSYALGIGMLGNALYATVDDTTNAGFTPTPDDYLAKISGLVEAINCFGKLETGNASNILINGDNGGGNFRVINAESQYFYSSLYVRNLANNVVVDNLISKDSKINPVNVIGTGNDPSKLPKNTKVGRMECIRYGVTSSNTVFRTALRNELALNTIVDEIIVTEHGNSYCVVSSANTASLGKTLKVGKIMVLDPSYSNNFLVNNSNPISDPVELDSYDVVSGTITVAVSGGSSIKCSGRNREWQAGTLITGAKVSANDYVYNLGAGAGAPYKYIVEQAGVVGTDAVLRVIEAKPVKLLYSPAALSAGATVVARTGTITGLKLGDRLAVEMDKPKGGTRFYAEVTSVDNFTVYHTNPTAVSVTVESGNLIIQMV
Physico‐chemical
properties
protein length:918 AA
molecular weight: 99369,58720 Da
isoelectric point:5,24871
aromaticity:0,07843
hydropathy:-0,21340

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXF41546.1
1 918
Domain Start End Length (AA) Confidence
N-terminal 1 289 289 0,9977
Central domain 290 783 495 0,9915
C-terminal 784 918 134 0,9723
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-289
Central
290-783
C-terminal
784-918

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage SH-Ab 15599
[NCBI] 		2202135 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXF41546.1 [NCBI]
Genbank nucleotide accession
MH517022.1 [NCBI]
CDS location
range 134730 -> 137486
strand -
CDS
ATGGAAGGTGAGATTGCAAGCTTCTTTGCTACAAAGGAGCAATTGAGCGCAGGTTTGGTTAAAAAAGCTGATTTGGGGGATGACAACAAATTAGTTTCATCTCAACTGCCAGACTTCATTAGTCAACATATTCAAGAAGTCAACCTCAAACTCTCTCAGGTTGATCTTGCTCTAACCAATAATCTTCAAACTGCTAAAGACTACGCAGAAGCATATACCGATGATGTAGCAGCTCGTAAAGCTGACTTGGTTGAAGGGAAGGTCCCTACAAATCAACTACCATCTCTCGGTTCTTATCCAGAATTTGAAACTGCTCTAAATGATGTAGCTAATGAAGCTCGTCATGATATGGTAACGCGTACTGATCAACTTGAGCGTTCAAAGGCTACGCTTGGAGAAGATGGTAAAATTATTCAAGAACAGTTACCATCTTATGATAAGATTCCAGATTTGAGTCCAGTTATTCAAGATTTATACGATTCAAAAGCTGACAAAACGAATGTCTATACTAAATCTGAGACATTAAGTGCAGATGGTATTGCAGCGCTATTGGAAAATAAGACCTATACCAGAGATAAACTGGATGAAAAATTGGATCTTGTCCGAGTTACCAATGAGAACTATTGGGAAGACAAATTCCTTAAAATAGGTGGTTATCCGTTTGGGGCAGTGATCCGTCTTGACAACAATACGGGGGAAGTGTATTCTACTGTAAATGGTAACAAGAAAAATCCTAATGTAGATATGACGGGTTGGAAGTTTAAAACGACTAACTCAGAGTTGGTTGAGTGGAACGGTATTACAGCTAAAAGTTATTTTGATATCAGATCGAAATTAATTGTCCTACCAGAGATGTTTGGAGACGATATTATCTTAGCTTCCGATTATGCAGTAGCTAACAATGGTATTCTATTAACTTCTGAAAAAGTATACGAAGTTAATCAAGAATTTAAACCTAAAAGTGGTTTGGTATGGTTTAGTAACAATTCAACACTAAAGCAAGTAGGCGCCGCAAGTCAAAGTGCTAGTGCATCTGGTTTAGCTCCGGAATCTAATGTTAGAATAATTGGAACTCTTACAGTAGACATGGGAAATCCAACTGTAGGGTGGGGAGAAAAGTGTCACGTCAGAATAGATAGTTTCACTAATAGAGAACCACAAATTTCTGGTTTTTATTTTGACACCCTAATCTTAAAGGGGGGGCATTTTAATTGTAATGGATTTGTGATGGCTGGGGGAGCGAATCTAGTTAGGGGAAAGAGGATCGAATGCGGCGATTCTGCAGTTATTGGTAGAGTCTTTATGGCTCATTGGGGCAACTTCCAAGATCATTATAATGACAACGGAACCTACAGACATAAGGTTGGTTGGTTACCTACTACTCACCCTCACGATTGTATAATCGAGGAAATTTCTGCTGGAAATTTAACTTGCGACACTAATGATTATTCCGGAGTGGTTTTGATTTCTGCTGGTTACGATATTAAGATTGGAAAGATTGAAGGATCTATTTTGGATCATACTATAACAGGGAAAGGTCTATTATTCTTAACTGCTGGCGATCTAGGATTTGCTTACGCAAATGAGAAAGACAAGAGGAATAGAATGAGAAATATCCAAGTGGGTTCAATACAAGGAACTTCTTATGCTTTAGGTATAGGTATGCTTGGCAATGCTCTATATGCAACTGTTGACGATACTACTAATGCTGGTTTTACTCCAACTCCAGACGATTATCTAGCTAAGATTTCTGGTTTAGTGGAGGCAATTAATTGTTTTGGCAAATTAGAAACTGGAAATGCGTCTAATATTCTCATAAACGGAGATAACGGAGGAGGTAATTTTAGAGTAATAAATGCAGAAAGTCAATATTTCTATTCTAGTTTATACGTCAGAAATTTAGCCAACAATGTAGTAGTTGATAATTTAATAAGTAAAGATTCCAAAATTAATCCAGTTAATGTCATCGGAACGGGTAATGATCCATCCAAATTACCCAAAAATACTAAAGTGGGTAGAATGGAATGTATTAGATATGGAGTCACTAGTTCCAACACCGTATTTAGAACAGCTTTAAGAAATGAATTAGCTTTAAATACAATAGTTGATGAGATTATCGTAACTGAACATGGAAATTCTTACTGCGTTGTTTCATCTGCTAATACTGCTAGTTTAGGCAAAACGCTAAAAGTAGGAAAGATTATGGTATTGGATCCTTCTTATTCAAACAATTTCCTAGTAAACAACTCTAATCCCATTTCAGACCCAGTAGAATTAGATTCTTATGATGTTGTATCTGGAACGATTACAGTTGCAGTAAGCGGTGGTTCTTCTATTAAGTGCTCTGGGCGAAACAGAGAATGGCAGGCTGGAACCTTAATTACTGGCGCCAAGGTTAGTGCTAATGATTATGTTTATAATTTAGGCGCTGGTGCTGGTGCGCCTTATAAGTATATAGTGGAGCAAGCTGGTGTAGTCGGTACAGATGCTGTTTTAAGAGTAATAGAAGCTAAGCCAGTAAAATTATTGTATTCTCCTGCAGCTTTATCCGCGGGAGCTACAGTTGTAGCTCGAACAGGAACTATAACTGGTTTAAAACTTGGCGATAGATTAGCGGTTGAAATGGATAAACCGAAAGGCGGAACTAGGTTTTATGCCGAAGTAACTTCTGTTGACAATTTCACTGTCTACCACACTAACCCAACCGCTGTATCTGTGACTGTGGAATCGGGAAATTTAATAATCCAAATGGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e8454b404510373e03b6999f27125ecbb62cf32df2358365c77d956854aff17e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6785
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genome sequencing of SH-Ab 15599, a novel bacteriophage targeting carbapenem-resistant Acinetobacter baumannii Ji,J., Wang,R., Luo,T., Xu,M., Guo,X., Hu,F., Li,M. and He,P. 2011-05-01 — GenBank