Protein

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Genbank accession
AXH70906.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MASYEVNTLNDAKAQSASEGDQITVKDTGSVYIVKDPLDASTASVKRNDGNVLVFSSAITVTNNSTSIKDLKENPVGSDIDDYDTSKAYKTGDIVYHDNRLLEANKDTSGTFTEDDWDIKVGPPFTVVNNRFTGVKTLIAEFKSFTPESGYYGMRYLEIKNAAGEIVNPDAIEYFISSPVITTNTGGGDVPDTILKFKNPDVDNSSSRALWPGSSSLAKRSVTRMVIVFNSPIDVHSMRVMLAKNTNQTAEYIRVFGSAVDTGALGAVDFLREPWIKLMGSFYSTDINNPGNSEWADLEMEDGGTLPRYYNHVKIADPVGYLTPTEYAGGRSFLSAHRGYIDPGKKLAGVIWTAEGTVLADFRKAAASFTNALTVGSAFVQPLKEPICYVFDGNRYDDPSPLGSAEPSAFLLDFRSNNFITPATSYVLVSTVDANGDPMQAVQYSSVSTVGFDENRGGYENKTYYTNDAIADNSSFTLSSSYGNSANVMVIYED
Physico‐chemical
properties
protein length:494 AA
molecular weight: 53706,82970 Da
isoelectric point:4,61506
aromaticity:0,10526
hydropathy:-0,30628

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH70906.1
1 494
Domain Start End Length (AA) Confidence
N-terminal 1 169 169 0,7620
Central domain 170 393 225 0,7066
C-terminal 394 494 100 0,8061
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-169
Central
170-393
C-terminal
394-494

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage BONAISHI
[NCBI] 		2283011 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio coralliilyticus
[NCBI] 		190893 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH70906.1 [NCBI]
Genbank nucleotide accession
MH595538 [NCBI]
CDS location
range 174351 -> 175835
strand +
CDS
ATGGCGAGTTATGAAGTGAATACACTCAATGATGCTAAAGCACAAAGTGCCTCAGAAGGAGACCAGATTACAGTAAAAGACACAGGTAGTGTTTACATTGTAAAAGATCCTTTAGATGCCTCTACAGCGTCAGTAAAAAGAAACGATGGTAATGTGTTAGTGTTCTCTAGTGCAATTACTGTCACTAATAATTCAACCTCAATTAAAGACCTTAAGGAAAACCCTGTAGGGTCTGACATCGATGATTACGATACCTCTAAGGCTTATAAGACTGGAGACATTGTTTATCATGATAATCGTTTATTAGAAGCGAATAAAGATACCTCAGGCACCTTTACAGAAGATGACTGGGATATTAAGGTAGGGCCTCCGTTTACCGTCGTGAACAATCGATTCACAGGTGTGAAGACTCTAATTGCAGAGTTTAAGTCTTTCACTCCAGAATCCGGATATTATGGCATGCGTTATCTTGAAATAAAGAATGCTGCTGGAGAAATAGTTAATCCGGATGCAATCGAATACTTCATATCTTCTCCTGTTATTACAACAAATACAGGCGGAGGTGATGTTCCAGACACTATTCTCAAATTTAAAAATCCCGATGTGGATAACAGCAGTTCTAGAGCTCTCTGGCCAGGATCGTCCAGTTTAGCGAAGAGATCGGTAACAAGGATGGTTATTGTGTTTAACAGCCCGATTGACGTTCATTCTATGCGCGTCATGCTTGCTAAAAACACTAATCAGACTGCTGAATACATTCGTGTCTTCGGAAGCGCGGTTGATACAGGGGCCTTAGGGGCTGTTGATTTCTTGAGAGAACCATGGATTAAATTAATGGGGAGTTTTTACAGCACTGACATTAATAATCCTGGGAATAGCGAATGGGCTGATTTGGAGATGGAAGATGGCGGGACGTTACCGAGATATTATAATCATGTCAAAATAGCGGATCCGGTAGGTTATCTTACACCCACAGAATATGCAGGAGGTAGAAGCTTCTTAAGTGCCCACCGCGGATATATTGACCCTGGTAAGAAACTTGCTGGAGTAATATGGACCGCCGAAGGGACAGTACTGGCTGACTTTAGAAAGGCCGCAGCAAGTTTCACTAACGCACTCACTGTAGGATCCGCCTTTGTTCAGCCTCTTAAGGAACCTATATGCTATGTCTTCGATGGAAACAGATATGATGATCCATCCCCGTTAGGCTCGGCCGAGCCGTCTGCGTTTCTATTAGACTTTAGGTCTAATAATTTCATTACTCCGGCTACAAGCTATGTTCTCGTTTCTACGGTAGATGCAAATGGTGACCCTATGCAGGCTGTACAGTATTCAAGTGTATCAACAGTGGGTTTTGATGAAAACCGCGGCGGTTACGAAAATAAAACCTATTATACTAATGATGCAATTGCTGATAATTCCTCGTTTACATTATCCAGCAGTTATGGCAATTCCGCAAACGTCATGGTTATTTATGAAGATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e02c70c5afcdecf4fd1b28fbc0a03389e7edc927f7cb5d421cb91ab67ffe5a3c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4798
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Therapeutic potential of a new jumbo phage that infects the coral pathogen Vibrio coralliilyticus Jacquemot,L., Bettarel,Y., Monjol,J., Corre,E., Halary,S., Desnues,C., Bouvier,T., Ferrier-Pages,C., Van Ngoc,B. and Baudoux,A.-C. 2018-10-24 — GenBank