Protein

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UniProt accession
E3SQS8 [UniProt]
Protein name
Virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSTIRVDQLRALSDNNFSINVSPNDNFEIQGTIEFDSGASFAVPVGTSAQRPTSPVGGMLRYNSELDRLEFYDGTTWQIFIGGSGAPNGLTEATAVTSVQALYDAGQVTDGLYWINFDGTARQYFVPLNSHPYYIMVGNWGGGADKFFQNASALSGNQLNGVGDNTPTGNWANNGTYGYYRNTGGSDFKYATMDARGIQYRYVKMKFNLYNYHSNDGVTSRNFLGISSAVGDGVTIMRDNSSEGDSQHIFTYYSAISNNDSNGCPSATPTFPSHVRVGTNPGAFMGTRFCCFSREGSSYTTEYVRNFTPYAGDSSGGTAPNAFTGDAWYEMDLGINNPHNLHCVIHSDQDSSNEDTYIKRGVVLVRPA
Physico‐chemical
properties
protein length:368 AA
molecular weight: 40065,24720 Da
isoelectric point:4,90739
aromaticity:0,12772
hydropathy:-0,45462

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
E3SQS8
1 368
Domain Start End Length (AA) Confidence
N-terminal 1 80 80 0,4539
Central domain 81 279 200 0,0050
C-terminal 280 368 88 0,9956
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-80
Central
81-279
C-terminal
280-368

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage Syn33
[NCBI] 		444878 Uroviricota > Caudoviricetes > Pantevenvirales > Brizovirus > Brizovirus syn33
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
6c9099025960043e1947b9b90c2f14f6f6f1e996681ea9f106bfc89b358c0739
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5548
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50