Protein

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Genbank accession
XSD85906.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,60
Protein sequence
MSDYGNLIGAAMPGTLADSSEYNVDGACFVSDEVESIICGKIVNVKAIHDGQYKEITDRFTAKTLAYGVAMRSQIETFVDDEGYMAYQPGDPINIISNGRAWVLSENIDSQPTFGQPVKVGADGFANAEGWDVAGWIYTGGWQKWNSLFYMVEIQINQSAPHIHAGERKLVNGATLTTNLKSPQAPNKDVTVTVEVSPKDAYNKTGTWHVDNEQCEIVPLNDTQARLSTKNEGSNEVHVTWAANDGSGTQAMIPFTFLAGSQDSGEVS
Physico‐chemical
properties
protein length:268 AA
molecular weight: 29050,81160 Da
isoelectric point:4,51082
aromaticity:0,08955
hydropathy:-0,34216

Domains

Domains [InterPro]
IPR056914
STR
1–129
IPR056914 DC_0179
XSD85906.1
1 268
Architecture
STR
STR 1-266 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XSD85906.1
1 268
Domain Start End Length (AA) Confidence
N-terminal 1 264 264 0,3526
Central domain 265 264 1 0,0734
C-terminal 265 268 3 0,9072
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-264
Central
265-264
C-terminal
265-268

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_Kpl_K50_evo11
[NCBI] 		3412882 Viruses >
Host Raoultella planticola
[NCBI] 		575 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XSD85906.1 [NCBI]
Genbank nucleotide accession
PQ569650 [NCBI]
CDS location
range 5867 -> 6673
strand +
CDS
ATGTCTGATTATGGTAATTTGATTGGCGCAGCAATGCCAGGTACGCTTGCTGACTCAAGCGAGTATAATGTTGATGGCGCTTGCTTTGTTTCTGATGAGGTGGAAAGCATTATTTGCGGAAAGATTGTTAACGTAAAAGCAATCCATGACGGGCAGTACAAGGAGATCACGGATCGGTTTACTGCAAAAACTTTGGCTTATGGCGTTGCTATGCGCTCGCAAATAGAGACGTTTGTTGATGATGAGGGCTACATGGCATATCAGCCAGGCGATCCAATCAACATTATTTCCAATGGTCGAGCCTGGGTTTTGTCGGAGAATATCGACTCTCAACCGACTTTCGGTCAACCTGTGAAAGTTGGCGCTGATGGCTTTGCCAATGCCGAAGGGTGGGATGTCGCCGGGTGGATTTATACGGGTGGATGGCAAAAATGGAACAGCCTTTTTTATATGGTTGAGATCCAGATTAACCAGAGCGCGCCGCATATTCACGCAGGGGAGCGAAAGCTGGTTAATGGCGCAACTTTGACCACCAACCTTAAAAGCCCACAGGCACCAAACAAGGATGTAACTGTTACGGTTGAGGTTTCGCCAAAGGACGCATACAACAAAACAGGTACTTGGCATGTAGATAATGAACAATGCGAGATTGTACCGCTCAACGATACGCAAGCTCGCCTGTCAACAAAGAACGAAGGTTCTAATGAGGTGCATGTTACCTGGGCTGCCAATGATGGCAGCGGGACTCAGGCCATGATTCCGTTTACTTTCCTTGCTGGTTCTCAAGACTCAGGGGAGGTATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b5750829e75e5f749ad3a925192c3a0467c31f7f418404a5e74a9d7077190a64
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8438
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50