Protein

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UniProt accession
A0A0D4DB35 [UniProt]
Protein name
Long tail fiber protein Gp37
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,77
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MAKLGPTNIFGALNVSSMAHVGSLVVDTELFAQNTQKVFHDAYHPNADKWTTARTLNLGGDASGSVSWDGSSDVTLNVTVADDSHTHETQYISKTQPYNDNILSGSIGGSDGKPLLQVNGASAYLGSTGRAGLQLATSTNPEWIGGGGAYKLFNDAYHPNADKWTNARTLTLSGDLSGSVSIDGSSNVTLSASVANDSHTHDGRYYTESEADSRFANVSGDTFTGDVYINAALMMRVGTTPAIQRADARADDTNYSRLHWYGRTDTGATSNFRHAWYDGSDYINVSASSSSVNFDRVSGTAIMRLQGNRVFADNYHPNADRWTTSRTLSLNGDASGSVSINGSSNVTLTVTVANDSHTHDGRYYTESESNSRYVYKSGDTMTGELKLKAGSHAGASIKALDGGVNGTNLIISSGGNTVIASGETTAANAVSSGNTSEDLHVGSDGTIYMYTNAQSWGSRKTFTLSTGGNFTAPGNITAYSDIRIKTDIKRIVNPLEKIDMLNGYTYERTDIDGPRQTGVIAQEVIEVLPEAVVEQNNMYSVSYGNMVGLLIEGIKEEKRKREALEKRLEKLEKLLN
Physico‐chemical
properties
protein length:576 AA
molecular weight: 61684,75530 Da
isoelectric point:5,39274
aromaticity:0,07639
hydropathy:-0,45972

Domains

Domains [InterPro]
DC_1451
STR
5–112
DC_1451 DC_1451
DC_1451
STR
95–280
DC_1451 IPR030392 Coil
IPR030392
CHP
480–568
IPR030392
A0A0D4DB35
1 576
Architecture
STR
STR 5-575 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A0D4DB35
1 576
Domain Start End Length (AA) Confidence
N-terminal 1 40 40 0,3882
Central domain 41 239 200 0,2076
C-terminal 240 576 336 0,8466
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-40
Central
41-239
C-terminal
240-576

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage ValKK3
[NCBI] 		1610855 Uroviricota > Caudoviricetes > Pantevenvirales > Schizotequatrovirus > Schizotequatrovirus valkk3
Host Vibrio alginolyticus NBRC 15630 = ATCC 17749
[NCBI] 		1219076 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AJT61189.1 [NCBI]
Genbank nucleotide accession
KP671755 [NCBI]
CDS location
range 216817 -> 218547
strand +
CDS
ATGGCAAAATTAGGTCCTACTAACATTTTCGGTGCGTTGAACGTATCGTCAATGGCACACGTCGGGAGTCTAGTTGTTGATACTGAGCTTTTTGCACAAAACACGCAAAAGGTGTTTCATGATGCCTATCACCCAAATGCAGATAAATGGACTACCGCTCGTACGTTGAATTTAGGCGGCGACGCGAGTGGTAGCGTCTCATGGGATGGTAGCTCAGATGTTACATTAAACGTCACAGTAGCAGACGACTCACATACTCACGAAACTCAATATATTAGTAAAACACAACCGTATAACGATAATATTCTAAGTGGGTCAATTGGCGGCTCAGATGGCAAACCGTTACTACAAGTTAATGGGGCTTCTGCGTATCTAGGCTCGACTGGGCGTGCAGGGTTACAATTAGCAACAAGCACCAACCCTGAGTGGATTGGTGGTGGGGGTGCATATAAACTTTTTAATGATGCATATCACCCAAATGCTGATAAATGGACTAATGCACGAACATTGACATTGAGTGGGGATTTGAGTGGATCAGTTTCAATTGATGGTAGTTCTAACGTAACGTTATCAGCTTCAGTTGCCAACGACTCACATACCCACGATGGTAGATATTATACTGAATCTGAAGCAGACTCTAGATTTGCAAATGTATCAGGCGATACGTTCACTGGCGACGTTTATATAAACGCTGCATTGATGATGAGGGTAGGTACAACTCCTGCTATACAGCGAGCTGATGCTAGAGCCGATGATACCAATTACTCTAGATTGCATTGGTATGGTCGAACTGACACGGGGGCGACTAGTAACTTTCGACATGCTTGGTATGATGGGTCTGATTACATTAATGTCAGTGCATCGTCTAGTAGCGTGAACTTTGACAGAGTTAGCGGAACTGCGATCATGCGTCTGCAAGGGAATCGCGTATTTGCAGATAACTATCACCCAAATGCAGACCGTTGGACTACATCTCGTACGCTGTCGTTGAATGGCGATGCAAGCGGCTCAGTTTCAATTAACGGTAGTTCGAACGTGACTTTAACCGTTACTGTTGCTAACGATTCTCATACTCACGACGGTCGTTATTACACAGAATCAGAATCGAATTCGAGATACGTGTATAAATCTGGCGATACGATGACAGGCGAATTGAAACTAAAGGCGGGTTCGCACGCAGGCGCGTCGATCAAAGCACTGGACGGCGGAGTTAACGGCACGAACTTGATTATATCGTCGGGTGGTAACACCGTAATTGCATCGGGTGAGACGACCGCTGCAAATGCTGTATCGTCGGGAAATACAAGCGAAGATCTTCATGTTGGTTCCGATGGTACGATATACATGTACACTAATGCTCAATCATGGGGTAGTCGCAAAACGTTCACATTATCTACGGGTGGTAATTTCACTGCGCCGGGCAATATCACTGCGTATTCTGATATAAGAATCAAAACTGATATTAAGCGCATTGTTAACCCTCTTGAAAAGATTGACATGCTGAATGGTTATACGTATGAGCGTACTGATATTGACGGCCCTCGTCAAACTGGGGTAATTGCTCAAGAAGTTATTGAAGTTCTACCAGAAGCAGTTGTTGAGCAAAACAACATGTATTCTGTTTCATACGGAAACATGGTTGGGTTGTTGATTGAAGGTATTAAAGAAGAGAAAAGAAAACGCGAAGCTCTTGAAAAACGACTTGAAAAACTAGAAAAACTACTTAATTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0098024 virus tail, fiber Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0019062 virion attachment to host cell Biological Process IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
b8ae9f363fb7a75e969d0cf783193c4e2b7d135c5c65c54a0ef4b387b4bb6aff
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6116
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
— — 27114905 PubMed