Protein

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Genbank accession
XLW52576.1 [GenBank]
Protein name
tail connector protein
RBP type
TSP
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,62
Protein sequence
MADLKVGSTTGGSVIWHQGNFPLNPAGDDVLYKSFKIYSEYNKPQAADNDFVSKASGGTYLNKVSFNAGVQIPFSKDGVIQTGNINGIFPGVDDGADFTANNLDIVSWYGVGFKSSLGNSGYTISINTRTGTINTKGGVYASGQVRSDMAAPVAVNDLTRKDYVDGAINIVTVNANSRVLRSGDTMTGNLTAPNLFSQNPASQPSHVPRFDQIVIKDSVQDFGYY
Physico‐chemical
properties
protein length:225 AA
molecular weight: 23969,25310 Da
isoelectric point:5,57462
aromaticity:0,10222
hydropathy:-0,25733

Domains

Domains [InterPro]
DC_0466
STR
1–223
DC_0466
IPR005601
STR
57–199
IPR005601
XLW52576.1
1 225
Architecture
STR
STR 1-223 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLW52576.1
1 225
Domain Start End Length (AA) Confidence
N-terminal 1 58 58 0,9684
Central domain 59 214 157 0,1949
C-terminal 215 225 10 0,8966
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-58
Central
59-214
C-terminal
215-225

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_JE01
[NCBI] 		3374908 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLW52576.1 [NCBI]
Genbank nucleotide accession
PQ471460 [NCBI]
CDS location
range 103431 -> 104108
strand -
CDS
ATGGCTGATTTAAAAGTAGGTTCAACAACAGGAGGCTCTGTCATTTGGCATCAAGGAAATTTTCCATTGAATCCAGCCGGTGACGATGTACTCTATAAATCATTTAAAATATATTCAGAATACAATAAACCACAAGCTGCTGATAACGATTTCGTTTCTAAAGCATCAGGTGGCACATATTTAAACAAAGTATCATTTAATGCAGGTGTACAAATCCCGTTTTCTAAAGACGGCGTAATTCAAACAGGGAACATTAATGGTATTTTTCCTGGAGTTGATGATGGGGCCGATTTTACAGCAAACAACCTAGATATCGTTTCTTGGTATGGTGTTGGATTTAAATCTTCATTAGGTAATTCAGGATATACGATATCCATTAATACTCGTACAGGCACAATTAATACTAAAGGCGGTGTTTACGCCTCTGGACAAGTTCGTTCAGACATGGCTGCACCTGTTGCGGTTAACGATCTTACTCGTAAAGATTATGTTGATGGAGCAATAAATATTGTTACAGTAAACGCAAACTCTAGGGTATTACGCTCTGGAGATACTATGACAGGAAATTTAACTGCGCCAAACCTTTTTTCACAGAATCCTGCATCTCAACCCTCACATGTTCCACGATTTGATCAAATTGTTATTAAGGATTCTGTTCAAGATTTCGGCTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e269ed38fdad15755f0af419ab6ef2a3d3088ecf0565d0a10484223261858df7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6725
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Pharmacodynamic and Metabolic Evaluation of Phage Cocktail Therapy in Ameliorating ETEC-Induced Diarrhea in Animal Models Wang,Z. 2024-12-08 — GenBank