Protein

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Genbank accession
WKV17069.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MPLMRLRNVGKTGVTTDIPSYDLKPSDWSWANNVRFQADRVQKVGGSKAALTRLMPQEHPLGVVQWPLTESLLYGTWKPGTSKGSLWVARGNSHENISKRSSGSTAFEYECSPEYSWDYTTLSNTVIFNTRLSDPQGIKNGQAYFSDLPGWGKPTSSTTANWKANRIRAFKNYLLCMGMWENGVEFPQRVRWSDVAMVGSLPSNWYENDQTKDGGFNDLTDSLSHIIDGRPLRDSFVVYTNRDTFIMDYVGGTMVFNFRKIFSDSGMLAPNCCVEFEGQHFVISEDDIFVHNGSTRRSVATGRVKDYLMAQIASNNHEATRVYAYPARKEIWITYVSDGNTPSNADDKVWSCDKAAIWSWQYDTWSFTDLPNIYDIGIGLSPETDSRFWYDSEFVPTPEDPTQYGDYPWEGPKIPEDIWKNKVQGFTRHVMFGASSDMCFYNLDNGYYWEKYDAVSKTISKVPVVCELERSALDFDEQEPDISYHKWWRAVYPQMGGTGTVRFYVGGSNSPNGEPVWDSWQDFDIELDSKVDCFSNYRYPAIKLLDSTEGEWSMVGYDVEYFKEGNR
Physico‐chemical
properties
protein length:567 AA
molecular weight: 64869,35210 Da
isoelectric point:4,93319
aromaticity:0,14286
hydropathy:-0,58219

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WKV17069.1
1 567
Domain Start End Length (AA) Confidence
N-terminal 1 55 55 0,9903
Central domain 56 254 200 0,1814
C-terminal 255 567 312 0,5863
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-55
Central
56-254
C-terminal
255-567

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PKM.Hi.22.6
[NCBI] 		3061950 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKV17069.1 [NCBI]
Genbank nucleotide accession
OR053651 [NCBI]
CDS location
range 22551 -> 24254
strand +
CDS
ATGCCTTTAATGAGATTACGAAATGTAGGGAAGACTGGTGTAACAACCGACATCCCTTCATATGATTTAAAACCCTCGGATTGGTCTTGGGCTAACAACGTTCGATTCCAAGCAGATAGGGTTCAGAAGGTGGGTGGCTCTAAGGCCGCCCTAACCCGACTTATGCCACAGGAACACCCACTTGGTGTTGTACAGTGGCCACTTACTGAATCACTGCTGTATGGGACTTGGAAGCCTGGAACATCTAAGGGTAGTTTATGGGTAGCCCGTGGTAACTCACATGAAAACATTTCTAAACGTTCTTCTGGTAGTACTGCTTTTGAATATGAATGTTCTCCTGAGTATTCGTGGGACTATACAACCCTCTCTAACACAGTAATATTCAATACACGTCTCTCAGACCCACAAGGTATTAAGAATGGTCAAGCTTACTTCTCAGACCTTCCGGGTTGGGGTAAGCCCACATCATCTACTACTGCAAACTGGAAAGCTAACCGAATTCGTGCATTTAAGAACTACTTACTGTGCATGGGTATGTGGGAGAATGGTGTAGAGTTTCCTCAGCGTGTACGATGGTCTGATGTTGCAATGGTCGGTTCACTTCCTTCTAATTGGTATGAAAATGACCAGACTAAAGATGGTGGTTTTAACGACCTGACAGACTCATTATCACACATCATTGATGGTCGTCCTTTGCGTGACTCCTTTGTTGTTTATACAAACCGAGACACGTTCATCATGGACTACGTTGGTGGTACAATGGTGTTCAACTTCCGTAAAATCTTCTCAGATTCAGGGATGCTTGCACCAAACTGTTGTGTTGAGTTTGAAGGTCAGCACTTTGTTATCTCAGAGGATGACATTTTCGTTCACAACGGTTCCACTCGTAGGTCTGTTGCTACAGGTCGTGTGAAAGATTACCTCATGGCTCAGATTGCCTCTAACAACCACGAAGCTACTCGTGTATATGCATATCCTGCTCGTAAAGAGATTTGGATTACATATGTTAGTGATGGTAACACTCCGTCTAACGCTGACGATAAGGTTTGGTCTTGTGATAAGGCTGCAATCTGGTCTTGGCAGTACGATACTTGGTCTTTTACAGACTTACCTAATATCTATGATATCGGTATCGGATTATCACCTGAGACTGACTCTCGTTTCTGGTATGATAGCGAGTTCGTACCAACACCTGAAGACCCGACACAATACGGCGACTATCCGTGGGAAGGTCCTAAGATTCCTGAAGATATTTGGAAGAACAAGGTTCAGGGGTTCACAAGACATGTAATGTTCGGTGCCTCATCTGATATGTGCTTCTACAACCTTGATAATGGTTACTATTGGGAGAAGTATGATGCTGTGTCTAAGACTATTTCCAAAGTTCCAGTTGTTTGTGAATTAGAGCGTTCTGCACTGGATTTCGATGAACAAGAACCTGATATCTCTTACCATAAATGGTGGAGGGCAGTTTACCCACAGATGGGTGGTACTGGTACGGTTCGATTCTATGTTGGTGGCTCTAACTCCCCTAACGGTGAACCTGTTTGGGATTCTTGGCAGGACTTTGATATCGAACTTGATTCTAAAGTTGACTGCTTCTCAAACTACAGATACCCAGCAATTAAACTGCTTGATTCTACGGAAGGTGAGTGGTCAATGGTTGGATATGATGTTGAATACTTCAAAGAAGGGAATAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f8035e9f567cd95f0b6662985cbc69ccac22b29697b577a67f22640f62d9910f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8503
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Characterization of Novel Plasmid-specific Phages Infecting Bacteria Carrying Diverse Conjugative Plasmids Parra,B., Cockx,B., Lutz,V.T., Bronsted,L., Smets,B.F. and Dechesne,A. 2024-01-11 — GenBank