Protein
View in Explore- Genbank accession
- QHZ59509.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TF
- Protein sequence
-
MNVNNAKLQREANTQSYLDQVAASTLEQLSNADYRSGLEAQRDAMGMNLDRAATRDAITKQISAQQNQAAATQKFDDMQAEVGQRGIVDQLRTLAAEGRAGEVNQILAEQQLINEGEIRKELTGVQDAIQNRQYRAAGEQRAQAAANRAAEAHSLSMAAGRENLAFTREQRDELRRDRDEAKLVSGTIATTFQDYDESRQAQSEIMRIVGKEVGMPTDDQGMPDMSRASQDQLDAFSNALNEAGVQANTSPTERRNAVLKSLVDAGVSSKGIAQAKQEMELRESLEGLAPQDRTKVEATIGAVNAELDTLQRTATEDYEREVARNPFVEPDKDPLGSVNKIVDKAVKSGFGWEGDRQDLNNMLVDFATNGIKLPDGRTAVVPSKLLEQAFNTTNTWLFKNAGDVEKRIIELMTTDGMTQMREDAPTIRENFLKTVTDIANQKRSNAVKVTRSAEREKGVTMDPTDDLTFALRGRKR
- Physico‐chemical
properties -
protein length: 476 AA molecular weight: 52555,77630 Da isoelectric point: 5,01021 aromaticity: 0,03782 hydropathy: -0,72941
Domains
Domains [InterPro]
DC_0193
STR
1–476
STR
1–476
Coil
Unmapped
157–184
Unmapped
157–184
1
476
Architecture
STR 1-476
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Pseudomonas phage LY218 [NCBI] |
2696354 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Pseudomonas aeruginosa [NCBI] |
287 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
QHZ59509.1
[NCBI]
Genbank nucleotide accession
MN906996
[NCBI]
CDS location
range 55121 -> 56551
strand -
strand -
CDS
ATGAACGTCAACAATGCCAAGTTGCAGCGTGAAGCCAACACGCAAAGCTATCTGGACCAGGTGGCAGCATCCACCCTGGAACAACTCAGTAACGCAGACTATCGCAGTGGTTTGGAGGCCCAACGTGATGCGATGGGGATGAACCTGGACCGTGCTGCTACACGGGATGCGATCACCAAGCAGATCAGTGCTCAGCAGAACCAAGCGGCTGCTACTCAGAAGTTCGACGACATGCAGGCTGAGGTAGGCCAACGAGGCATCGTAGATCAGCTTCGTACCCTGGCAGCTGAAGGCCGTGCTGGTGAAGTCAACCAGATCTTGGCTGAGCAACAGCTGATCAACGAGGGCGAGATCCGCAAGGAACTCACCGGTGTGCAGGATGCTATACAGAATCGGCAGTACCGGGCAGCTGGTGAACAGCGTGCACAGGCAGCGGCCAACCGGGCAGCTGAAGCACACTCCCTCTCCATGGCTGCTGGTCGGGAGAACCTGGCTTTCACTCGTGAGCAGCGTGATGAACTACGCCGTGATCGGGATGAAGCGAAGCTGGTTTCGGGAACCATCGCTACTACCTTCCAGGACTACGACGAGTCCCGTCAGGCTCAGAGCGAGATCATGCGGATCGTGGGCAAGGAAGTCGGTATGCCTACCGATGACCAGGGCATGCCCGACATGAGCCGTGCTTCGCAAGACCAGCTTGATGCCTTCAGCAATGCGCTGAACGAAGCTGGTGTACAAGCCAATACCTCTCCTACCGAGCGGCGGAATGCTGTACTCAAGTCTCTCGTGGATGCAGGGGTAAGCTCGAAGGGTATCGCCCAGGCCAAGCAAGAGATGGAACTCCGGGAATCCCTGGAGGGTCTGGCTCCGCAAGATCGCACGAAGGTTGAAGCAACCATCGGTGCGGTTAACGCAGAACTGGATACCCTGCAACGGACGGCTACCGAGGACTACGAACGGGAAGTTGCACGTAACCCGTTTGTCGAGCCTGACAAGGATCCGCTGGGTTCGGTCAACAAGATCGTAGACAAGGCTGTGAAGTCTGGTTTCGGCTGGGAAGGTGACCGCCAGGATCTGAACAACATGCTCGTGGACTTCGCCACCAATGGCATCAAGCTACCGGACGGACGTACTGCTGTAGTCCCGTCGAAGCTACTGGAGCAGGCGTTCAACACCACGAACACTTGGCTGTTCAAGAATGCCGGTGACGTGGAGAAACGGATCATCGAACTCATGACCACTGATGGCATGACTCAGATGCGAGAAGACGCTCCGACCATCCGGGAAAACTTCCTGAAAACCGTGACGGACATCGCCAACCAAAAACGGTCAAATGCCGTTAAGGTAACTCGCTCGGCAGAACGGGAAAAGGGTGTTACCATGGACCCAACCGATGATCTAACTTTTGCACTACGAGGGAGGAAACGATAG
Genome Context
Genome Context
Tertiary structure
PDB ID
5af085133ea3977f5eaead8408efa5bdfd792c55fe1ec3cfd6ad5691691091e5
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Isolation and Characterization of Pseudomonas Bacteriophage LY218 | Amshaqn,A., Blair,B. and Murdock,C. | — | — | GenBank |