Protein
View in Explore- Genbank accession
- CAH1088168.1 [GenBank]
- Protein name
- major facilitator superfamily protein
- RBP type
-
TSP
- Protein sequence
-
MNSSSTPSTLNTEATSVLSREWIHKGTKAYKHAGFALFLVGFASFSLIYCVQPLLPAFSQSFQISPASSSLALSLTTAFLAISIVLSSAFSQAIGRRGVIFTSMLCAAILNIVSMFTPNWHSLLMARALEGLLLGGVPAVTMAWIAEEIAPEHLGKTMGLYIAGTAFGGMMGRVGMGILVEYFSWRAALGLLGAICFICSIAFLKLLPASRNFVQKKGLNLGFHMQMWRAHLSNTKLLRLFAIGFLLTSVFVTLFNYATFRLSGAPYSLSQTQISLIFLSYSFGMVSSSLAGSLADRFGKKTMMMSGFALMIVGSLMTLLSSLFGIIIGIAFITTGFFITHSLTSSSVGAESKQAKAHASSLYLLFYYMGSSIVGSAGGWFWLHGGWSAIVGLTVFLSLIGIFLAIYTSHAKAH
- Physico‐chemical
properties -
protein length: 414 AA molecular weight: 44450,98480 Da isoelectric point: 9,88225 aromaticity: 0,12560 hydropathy: 0,76546
Domains
Domains [InterPro]
PTHR43271
Unmapped
21–408
Unmapped
21–408
IPR036259
STR
23–408
STR
23–408
IPR036259
STR
27–411
STR
27–411
IPR020846
STR
29–413
STR
29–413
cd17324
STR
35–406
STR
35–406
IPR011701
STR
37–259
STR
37–259
1
414
Architecture
STR 23-413 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
414
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 241 | 241 | 0,1931 |
| Central domain | 242 | 403 | 163 | 0,0309 |
| C-terminal | 404 | 414 | 10 | 0,9914 |
Note: Constraints were applied during segmentation.
Fixed 198 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 198 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-241
1-241
Central
242-403
242-403
C-terminal
404-414
404-414
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Acinetobacter phage MD-2021a [NCBI] |
2899278 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAH1088168.1
[NCBI]
Genbank nucleotide accession
CAKLQF020000016
[NCBI]
CDS location
range 79751 -> 80995
strand -
strand -
CDS
ATGAACTCTTCATCTACACCCAGTACCTTAAACACTGAGGCAACGTCTGTTCTTTCCCGTGAGTGGATTCACAAAGGGACTAAAGCTTATAAACATGCAGGATTTGCTTTATTCCTCGTAGGTTTTGCCAGCTTCTCTCTAATTTATTGTGTACAGCCACTCTTACCTGCATTTAGCCAAAGCTTTCAGATTAGTCCTGCGAGTAGCTCTTTGGCACTGTCATTAACGACTGCCTTTTTAGCCATTTCGATTGTGCTATCGAGTGCCTTTTCACAAGCGATTGGCCGTCGCGGTGTGATTTTTACATCAATGCTGTGTGCAGCAATTTTAAATATTGTCTCGATGTTTACACCGAACTGGCACAGTTTACTGATGGCGCGTGCGTTAGAAGGTTTATTACTCGGTGGCGTACCCGCAGTGACTATGGCTTGGATTGCCGAAGAAATTGCACCTGAACACCTCGGTAAAACTATGGGTTTATATATTGCAGGTACAGCCTTTGGTGGCATGATGGGCCGTGTCGGTATGGGTATTTTGGTTGAATATTTTTCATGGCGCGCCGCCTTAGGCCTACTTGGAGCAATCTGTTTTATTTGCTCAATTGCATTTTTAAAATTACTTCCCGCATCGCGTAATTTTGTGCAGAAAAAAGGGCTGAATTTAGGCTTTCACATGCAAATGTGGCGTGCTCATTTAAGCAATACTAAATTATTACGCCTATTTGCCATTGGTTTCTTGCTCACCAGTGTTTTTGTCACCCTGTTTAACTATGCGACCTTCCGCTTAAGCGGCGCACCTTATTCACTCAGCCAGACACAAATTAGCCTTATTTTCTTGTCGTATAGCTTTGGTATGGTGTCTTCATCGTTGGCAGGTAGCTTAGCCGATCGCTTCGGTAAAAAAACCATGATGATGAGTGGCTTTGCCTTGATGATCGTGGGTAGTCTCATGACCCTGCTCAGCTCTCTTTTCGGCATTATCATTGGCATCGCATTTATTACCACAGGCTTCTTTATTACCCACTCACTTACGAGTAGTTCTGTGGGTGCTGAAAGCAAACAAGCTAAAGCTCATGCCAGTTCGCTTTACTTGCTGTTTTACTATATGGGTTCAAGTATTGTCGGCTCGGCGGGCGGTTGGTTCTGGTTACACGGTGGCTGGAGTGCGATTGTCGGCTTAACCGTGTTCTTGTCTTTAATTGGAATATTTTTAGCGATTTATACATCACATGCCAAAGCGCATTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
f523ef9aca0b8f7ffa815a74765433b06bf89000d40aba8cb3089edd5ae6c3ac
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50