Protein

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Genbank accession
WIU42468.1 [GenBank]
Protein name
baseplate upper protein
RBP type
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MATLVGDAATMQGKYVVLDTTVGSTRSVVVPQLSGHQGDTGRIIYLAIKDGTTPHNMDGQKLVLKAKDASGTPKVSDTMTAVDSSAGGLVQFTVPAQFYQADGPYSTAYFELRSTTTDTVISTINVSFEVLESATIMTTGQSEVYNNAMSNAMESVNASINSQLKILQDQVSNAAALAKTAQSSLDALTAAAKANSFAALAGNNEFTGNNNFDGTTTIKNLSSPTIDNLKSTLTNNINSVSNSVSSQLSGKLTVEDAWTRNYTLGGAFTAPSGGTNQFALSRYKIMDGLVIITGRGDLVVNSASEYYEGSITLPWVVDNADTAFAQVYWNDANGASSYALPHLGTRSNQIGISMKGARTNQTVRMSLIIFTQDY
Physico‐chemical
properties
protein length:374 AA
molecular weight: 39515,50110 Da
isoelectric point:4,98139
aromaticity:0,07219
hydropathy:-0,12406

Domains

Domains [InterPro]
IPR018913
ATT
30–155
IPR018913
IPR018913
ATT
33–155
IPR018913
DC_1243
STR
135–374
DC_1243
WIU42468.1
1 374
Architecture
ATT
STR
ATT 30-155 | STR 156-374
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lacfervirus LFP01
[NCBI] 		3430317 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactobacillus fermentum
[NCBI] 		1613 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WIU42468.1 [NCBI]
Genbank nucleotide accession
OR048821 [NCBI]
CDS location
range 18133 -> 19257
strand +
CDS
ATGGCAACTCTAGTAGGTGACGCCGCCACTATGCAAGGAAAGTATGTGGTGCTAGACACCACCGTTGGCTCCACGCGATCTGTTGTGGTCCCACAACTGTCGGGGCATCAAGGCGACACTGGTCGGATTATCTATCTGGCCATTAAGGATGGCACAACGCCTCACAACATGGACGGACAGAAACTGGTTTTGAAGGCGAAAGACGCAAGCGGGACGCCAAAAGTGTCTGATACCATGACCGCTGTCGATTCTTCGGCTGGGGGCCTAGTGCAGTTCACAGTGCCAGCACAGTTTTATCAAGCGGACGGGCCTTACAGCACGGCTTACTTTGAGCTTAGGTCTACTACGACCGACACGGTTATCAGTACGATCAACGTCAGCTTTGAAGTGCTTGAATCGGCCACCATCATGACGACCGGTCAAAGCGAGGTTTATAACAACGCAATGAGCAACGCGATGGAATCAGTCAACGCGTCCATCAACAGCCAGCTCAAAATCTTACAAGATCAAGTTAGCAACGCGGCCGCGCTGGCTAAGACTGCCCAATCAAGTCTTGACGCGCTCACGGCCGCCGCTAAGGCTAACTCGTTTGCGGCATTGGCTGGTAACAACGAATTTACTGGTAACAACAATTTCGACGGAACGACCACGATTAAAAATCTATCAAGTCCAACAATTGACAATCTTAAATCAACGCTGACTAACAACATTAACTCCGTGTCTAACAGCGTTAGCTCACAACTATCTGGGAAGCTGACGGTGGAAGACGCTTGGACGCGGAATTACACGTTAGGCGGAGCTTTTACTGCGCCAAGCGGTGGGACTAACCAATTTGCATTGAGCCGCTACAAGATCATGGATGGTTTGGTAATTATCACCGGACGTGGTGATTTAGTTGTCAACTCTGCGAGTGAGTATTACGAAGGAAGCATCACACTCCCGTGGGTAGTGGACAACGCCGACACGGCTTTTGCACAAGTCTATTGGAACGATGCCAACGGGGCAAGTTCATACGCACTTCCTCACTTAGGGACACGGAGCAATCAAATTGGTATTTCAATGAAGGGGGCACGGACTAACCAAACGGTTAGGATGTCGCTGATCATCTTCACGCAAGATTATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
6f75ff1902c40ed42aec0f02df29077d4838c8609647e753e16a8dec2b8029fa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7508
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50