Protein

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Genbank accession
XNM19633.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYFEIKDVVTSPEAAVDQLVEKINSVTGYTCVKVSASTFVFEGPAKSGQRWSVQCVIGKSSSTSRYKMHSWLGEGLDGTTLINRSGQIAPEENGRYNSYYDHLFLLNQYTRIQLFVGSGGVIIRIWSYDSASAEQYTWRPLWVFALGESAPEYGSKPFILGSTPQVRRPRSEYMAYGLGSLYQTGHGTVNRNIMFMKHDGSGGKSWATSTIQENGLYGGNNSTERRYEAIKSKLFYSKSLTSVFLPIFIRSGGVVYGELTDLKMCYTKYLATGNTITYNSNDWSVCAVGTYGQHEANALAFALKV
Physico‐chemical
properties
protein length:306 AA
molecular weight: 33974,90030 Da
isoelectric point:8,84643
aromaticity:0,13072
hydropathy:-0,25556

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNM19633.1
1 306
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0237
Central domain 11 209 200 0,0029
C-terminal 210 306 96 0,9991
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-306

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VhaS_R31B
[NCBI] 		3384839 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNM19633.1 [NCBI]
Genbank nucleotide accession
PQ614275 [NCBI]
CDS location
range 29038 -> 29958
strand -
CDS
ATGGCGTATTTTGAAATTAAAGATGTGGTGACAAGTCCTGAAGCTGCTGTGGACCAACTTGTTGAAAAGATTAACTCAGTCACAGGTTATACTTGCGTAAAGGTGTCTGCGAGTACCTTTGTATTTGAAGGACCTGCGAAATCCGGTCAGCGTTGGTCGGTTCAATGTGTTATTGGTAAATCCTCATCCACATCTCGGTATAAAATGCATTCTTGGTTGGGAGAGGGGTTGGACGGGACAACCCTTATTAACCGCTCAGGTCAAATTGCCCCAGAGGAGAACGGGCGGTATAACAGCTACTATGACCATTTATTTCTTCTTAACCAATACACGAGAATTCAGCTATTTGTTGGGTCAGGTGGGGTTATTATTCGAATTTGGAGCTATGACTCGGCGTCAGCTGAGCAGTATACGTGGCGTCCGTTATGGGTGTTCGCACTTGGGGAATCTGCTCCAGAATACGGTAGTAAACCGTTCATACTTGGTTCCACCCCTCAAGTGAGGCGTCCTAGGTCCGAGTATATGGCTTATGGGCTTGGGAGTTTGTACCAGACAGGTCATGGTACTGTTAACCGTAACATTATGTTCATGAAGCATGACGGGTCCGGTGGGAAATCATGGGCCACCAGTACAATTCAGGAAAATGGTTTATACGGTGGTAACAATAGCACAGAGCGTCGATACGAAGCTATTAAGTCTAAGTTGTTTTATTCTAAGAGTTTGACCTCGGTGTTCCTGCCAATTTTTATTCGCTCTGGCGGTGTCGTGTATGGTGAACTTACTGATTTGAAGATGTGCTATACTAAGTATCTTGCAACGGGTAACACCATTACATACAACTCAAACGATTGGTCTGTTTGCGCTGTCGGAACTTACGGTCAGCACGAAGCCAATGCACTAGCGTTCGCGCTCAAGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c9b1bf1d8002d4812e7cacc9d0b9b3247c71902dca1eca05c5c4354668636809
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6025
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50