Protein

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Genbank accession
XRX14173.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYLEGKCTTGGVATPGVKVYAFRTGQWGAPASGISDFEGKWRVEGLVDDVPYDVAFVHPDGQWEGKMSSRRMPIFDPFADPYWEDTTLLVHFDDVAGQTPTNERGIIGFRIGGIGASISDNAPTPKFGTGALNINNGATSAGFWFGTGAATGIVADTNPMYMGSTDNFTVEGWFYCRSGVATSTYRDICILAANDKGVVINGSSRLVYYDGGTKIEGPSMTDLYDKWVWLVVQRENGITGMWLDGQRIGTFGDTGVKNAFRIGSNTQAAEQFFGGLDEWRHTRAARYPGSPATIEVPTAPFTPGNPIRSDSFTVPRLWNYEKIGGTANWEITAGRLNMDQPAGTPAQTHFVRRDFTSQNLFCEAEIFQAQDSGFMWRFVDENNYYMISLMDDQSPSLPNTARIYKRVGGSFTKIGETPITLTRGSANKVRVEMTGTTITLVINGASIGTYTDSAISVAGRIGFKAESRSEYNGQLIVDNFKWDTLL
Physico‐chemical
properties
protein length:487 AA
molecular weight: 53233,89140 Da
isoelectric point:5,09462
aromaticity:0,11910
hydropathy:-0,28214

Domains

Domains [InterPro]
DC_0826
ATT
1–135
DC_0826 IPR013320 DC_0966
G3DSA:2.60.120.200
STR
118–284
G3DSA:2.60.120.200 G3DSA:2.60.120.560
XRX14173.1
1 487
Architecture
ATT
STR
RBD
ATT 1-135 | STR 136-284 | RBD 302-487
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRX14173.1
1 487
Domain Start End Length (AA) Confidence
N-terminal 1 102 102 0,7718
Central domain 103 308 207 0,5503
C-terminal 309 487 178 0,9515
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-102
Central
103-308
C-terminal
309-487

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage Yut3
[NCBI] 		3400888 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRX14173.1 [NCBI]
Genbank nucleotide accession
PV130724 [NCBI]
CDS location
range 123167 -> 124630
strand +
CDS
ATGGCATATCTAGAAGGAAAGTGCACAACTGGTGGGGTCGCCACCCCAGGAGTCAAGGTTTACGCATTCCGCACCGGACAATGGGGCGCGCCTGCATCAGGCATTAGCGACTTTGAAGGTAAGTGGCGTGTTGAAGGATTGGTTGATGACGTCCCTTATGACGTCGCTTTCGTGCATCCGGATGGACAGTGGGAAGGTAAGATGTCAAGTCGACGCATGCCTATCTTTGATCCGTTTGCCGATCCATACTGGGAAGACACAACTCTACTTGTTCACTTTGATGACGTTGCCGGTCAAACCCCGACGAATGAACGCGGCATCATAGGATTCCGAATTGGAGGAATTGGGGCGTCGATCTCAGACAATGCTCCAACTCCCAAGTTTGGAACAGGAGCCTTGAACATCAATAACGGCGCCACTTCTGCCGGTTTCTGGTTTGGTACAGGTGCAGCAACCGGTATCGTCGCCGACACCAATCCTATGTATATGGGTTCCACTGACAACTTCACTGTAGAGGGTTGGTTCTATTGCCGAAGTGGCGTAGCGACCAGCACCTACCGAGACATCTGCATTCTCGCAGCCAATGACAAAGGCGTCGTGATCAATGGTAGCAGTCGACTTGTCTACTATGATGGCGGAACCAAGATCGAAGGCCCAAGCATGACTGATCTATATGATAAATGGGTGTGGCTTGTTGTTCAGCGTGAAAACGGTATAACGGGGATGTGGCTAGACGGTCAGAGAATCGGCACTTTTGGTGATACGGGAGTCAAAAACGCTTTCCGAATCGGATCCAACACCCAAGCGGCTGAACAATTCTTCGGCGGTCTGGATGAGTGGAGACATACGAGGGCAGCCAGATATCCGGGATCTCCTGCAACTATTGAAGTTCCTACCGCTCCGTTCACACCAGGAAACCCAATCCGATCAGATAGTTTCACTGTACCTCGACTTTGGAACTACGAAAAGATTGGCGGAACAGCCAACTGGGAAATCACGGCTGGTCGCCTCAATATGGACCAGCCGGCTGGAACACCAGCCCAGACTCACTTCGTCAGGCGAGACTTCACCTCGCAGAACCTTTTCTGTGAGGCTGAGATCTTCCAAGCCCAAGACTCCGGATTTATGTGGCGTTTTGTTGATGAAAACAACTACTATATGATCTCTCTTATGGACGATCAGTCTCCTTCTCTTCCAAACACCGCTAGAATCTATAAGCGTGTTGGTGGCAGCTTCACAAAGATTGGCGAAACTCCAATCACCTTGACTCGCGGATCAGCCAACAAGGTGAGAGTGGAGATGACAGGAACGACTATCACTCTCGTGATCAATGGTGCGTCCATTGGAACCTACACAGATTCGGCAATCTCTGTTGCTGGACGTATTGGTTTCAAGGCGGAATCTCGATCTGAATACAACGGACAGCTGATCGTTGACAACTTCAAGTGGGACACACTCCTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9229db4ea80d5873ea5b7332eeac314164cb07fb8a5ae4f3cb2fe15249b26888
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8379
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50