Protein

View in Explore
Genbank accession
XCO36504.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDQDIKTVIQYPVGATEFDIPFDYLSRKFVRVSLVADDNRRLLSNITEYRYVSKTRVKLLVETTGFDRVEIRRFTSASERVVDFSDGSVLRAADLNVSQIQSAHIAEEARDAALMAMPQDDAGNLDARNRRIVRLAPGIAGTDAVNKDQLDTTLGEAGGILSDMKDLEGELHDYIEKFADDTSVVRGVAWVYNLGSANGGENVITIDKPTRTYAVPYIEVNGSRQEVGYHYQFDLNTQSISLVKPLEKGDFLMAMTTESSVPLESMLASTVGASGIGTLNGMTVQERLDAMNSVSILEYHKTPYANFGAALEAAAAAAMSNGRGTILIPAGRYTSERAANITLSKGLRLVFAPDAWVTCYSPHDVINIDINKQHLNITANGARIMADWAFGLDASSVAAIRLKDDTLDKSCSVTDLKVGFKSGGGKFGHAIHGSAINLSTFYRCLLQGVYGIHIEASKDRGQYAHAMGNQIVGCAIFTTYDAITISNKGAFGCEGLLVFGCELLSDDTAISIRNDGLNSQNYLPPLFRIEGNHLNSYRALYCKDVSRLHFVNNDVQSRYTTGRTPRGQLEVGGVQGFHHHGNTYSASKVGTAVDSDKATPVFQFESTLANAYFLSSCNNYWLDGATNPVYGFESTSKMSTIRSSGETLQSAASWTASGYSQYFRPDYSTIIGNAGASAGMSQSNGVTFSGGTLTVTQAPVAGSTVNVSLSVLPNTSQITRITCASSLVGKTVDIRLSAAEVSVTHGSDLLCPDQKSFKLWLPNVIRVFFINTAQAVIVGYGGITASHTGITSPPATRTSPGYHGAEYFDAVGKYLYKYQGGYGWYRIKFEEF
Physico‐chemical
properties
protein length:832 AA
molecular weight: 90065,02490 Da
isoelectric point:5,93958
aromaticity:0,09255
hydropathy:-0,13678

Domains

Domains [InterPro]
DC_0225
ATT
1–200
DC_0225 DC_1079
IPR005604
ATT
3–127
IPR005604 IPR012334
IPR011050
STR
308–624
IPR011050
XCO36504.1
1 832
Architecture
ATT
STR
ATT 1-200 | STR 275-832
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO36504.1
1 832
Domain Start End Length (AA) Confidence
N-terminal 1 298 298 0,9952
Central domain 299 674 377 0,9752
C-terminal 675 832 157 0,9598
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-298
Central
299-674
C-terminal
675-832

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_066007
[NCBI] 		3232181 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO36504.1 [NCBI]
Genbank nucleotide accession
PP889451 [NCBI]
CDS location
range 36113 -> 38611
strand +
CDS
ATGGACCAAGACATTAAAACAGTCATTCAGTACCCAGTAGGGGCCACTGAGTTCGACATCCCGTTCGACTACCTGTCCCGCAAGTTCGTCCGAGTGTCACTAGTAGCTGACGACAACCGCAGACTGCTGAGTAACATCACTGAGTACCGCTACGTGTCTAAGACCAGAGTGAAACTCCTTGTGGAAACTACCGGGTTCGACCGTGTGGAAATCCGCAGATTCACCTCAGCTTCAGAGCGCGTGGTCGACTTCAGCGACGGCTCGGTTCTCCGTGCAGCCGACCTTAACGTATCTCAAATACAGTCGGCACATATCGCAGAGGAAGCACGTGACGCGGCGCTTATGGCCATGCCACAGGATGACGCTGGGAACCTTGATGCGCGCAACCGTAGAATCGTAAGGTTGGCACCGGGTATCGCCGGGACGGATGCAGTGAACAAGGACCAGCTTGACACCACTCTAGGGGAGGCTGGTGGAATCCTATCGGACATGAAGGACCTAGAGGGAGAGCTTCACGACTACATCGAGAAGTTTGCAGACGACACGTCGGTTGTGCGTGGGGTGGCGTGGGTGTATAACTTAGGGTCTGCAAATGGTGGTGAGAACGTTATTACCATTGATAAACCGACCCGCACGTACGCTGTGCCGTACATTGAGGTTAACGGCTCGCGTCAGGAGGTGGGATACCACTACCAGTTCGACCTTAATACTCAGAGCATCTCCCTAGTTAAGCCTCTGGAGAAGGGTGACTTCTTAATGGCCATGACCACGGAGTCGAGCGTTCCGTTAGAATCCATGCTGGCGTCTACCGTTGGTGCGTCTGGCATTGGAACCTTAAATGGAATGACCGTGCAGGAGCGACTCGACGCCATGAACTCAGTATCAATCCTTGAGTACCATAAGACGCCTTACGCTAACTTTGGGGCCGCCTTGGAGGCTGCTGCTGCTGCTGCTATGTCTAATGGGCGCGGTACAATCTTAATCCCAGCTGGCAGGTACACCTCAGAGCGTGCAGCCAATATCACTTTGAGCAAGGGTCTCCGGCTTGTGTTCGCACCAGATGCTTGGGTTACATGCTACTCGCCACATGATGTAATCAATATCGACATTAATAAGCAGCACCTGAACATCACAGCGAACGGTGCGCGAATTATGGCCGACTGGGCCTTTGGCTTAGATGCATCTAGTGTAGCAGCCATCCGGTTAAAGGATGACACATTGGATAAATCGTGCTCTGTGACGGACCTAAAGGTTGGGTTTAAATCTGGCGGCGGTAAGTTCGGACACGCAATCCACGGCTCAGCCATTAACCTCTCGACATTCTATCGGTGCCTCCTTCAGGGCGTGTATGGTATTCATATAGAGGCTTCTAAGGACCGAGGTCAGTATGCCCACGCCATGGGTAACCAAATTGTAGGCTGTGCGATATTTACCACCTACGACGCAATTACCATTAGCAACAAGGGGGCGTTTGGGTGTGAAGGACTTCTTGTGTTTGGGTGCGAACTCCTCAGTGACGACACTGCGATTTCCATACGAAATGACGGATTAAACAGCCAGAACTACCTCCCACCGCTGTTCCGCATAGAAGGAAACCACCTGAATAGCTACAGGGCGTTGTACTGTAAGGATGTGAGTAGACTACACTTTGTCAACAATGACGTGCAGTCACGCTACACCACAGGGCGTACACCGAGAGGGCAGTTAGAGGTCGGTGGAGTACAAGGCTTCCACCACCACGGAAATACATACTCAGCCTCCAAGGTTGGTACCGCTGTTGATTCCGATAAGGCGACACCTGTGTTCCAGTTCGAATCAACACTTGCGAACGCTTACTTCCTCAGCTCTTGCAACAACTACTGGCTGGACGGTGCGACAAATCCAGTTTATGGCTTCGAGTCTACATCGAAAATGTCCACCATTAGAAGTTCTGGGGAAACCTTACAATCAGCAGCAAGCTGGACTGCCTCTGGGTATTCGCAGTATTTCCGCCCGGATTACTCCACTATTATCGGGAACGCAGGAGCCTCAGCTGGGATGTCTCAATCTAACGGTGTAACATTCTCGGGTGGAACACTTACAGTAACTCAGGCTCCTGTAGCTGGGTCCACCGTCAACGTTTCTCTTAGTGTATTACCAAACACCTCCCAGATTACAAGGATAACGTGCGCGTCTAGCCTAGTAGGGAAGACAGTGGACATTCGGCTATCTGCCGCAGAGGTGTCTGTAACACATGGTTCCGACCTTCTGTGTCCTGACCAGAAGAGTTTCAAACTGTGGCTTCCCAATGTTATTCGGGTGTTCTTCATCAACACTGCGCAGGCCGTGATAGTAGGATATGGCGGCATCACTGCATCCCATACTGGCATCACATCTCCACCCGCAACTCGGACATCTCCGGGTTATCACGGTGCCGAGTACTTTGATGCAGTTGGTAAGTACCTTTACAAGTATCAGGGCGGCTATGGCTGGTACCGGATTAAATTCGAAGAGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0da0519dcffabba2eaa52bbf9adda7b08a34b9c02c50463db12cd7e569cf36b2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3282
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank