Protein

View in Explore
Genbank accession
QBX25167.1 [GenBank]
Protein name
endopeptidase
RBP type
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MIYLKEGNIPLNFCFEDDITQEANNTYQLSFKFPVSDDKWVLLKNEVHLLADDLFGEQEFVIIDVQKGHGYITVYANQVATLLNGQSVRKIDVDRANGMTVMNKLVEGLKRECPFTFFSDIQDKHTLRLDNVSVIDALTKGQHSIIGQWGGDLVRDKYSVRLLKNGGIENQSLFMYKKNLSEYKESTTTKSLKTRIHFRKVITASGEGEKEKILEVTVDSPLVDKYKHIYEYDMEVQDQDVKTLDDLKEYGKKYFQSSLCDLPEENLEINVIGQADQPVKLFDTVSIYYELYDVDIRKKITKYSYSPMAKKLKKISFGKISRSLGGAIGQIIDDSVKDKIASHDAAYDAKVQQLIDNANAEYDKKAKSLEQDITDGIEQAKAKAEVVKEEINAEISEKIKAANKANKDEIVEEFKAKYNGIEVKVEDLKATANGLSEMNTAIQQEMDNFKTSTASKFAGISGAQSHYEQSTNKAISDLVKVTQNKADRSYVEQTAHGIKETISNIKIGRRNLIKGTRLFPGVRGVVGEFNGFKVIRSEITKENQKVVDPFVTNTTVPMIGTEYTAVFWARASRNDYRCVLHLFSPNSVTKVVTSTGFVADNLIDGYAIFTITTEWRPYWVKWTQTPVSVPKRVIFGRHGANYGQKKGDWLEICAPAVFEGNMPGDWNEAPEDATSTFQAEFEKTARGLETKITSFESYVQADGARQETLKKYIEDKTASSLSAFRENIESGYISKSKYEEDSRGITRKFEELKTGGQNLVLNSGDPQNMNNWGEISPDSAPTAQIVTNSLYFNETRKLIALNNRNSTLQEFLSSRRFNVRQNTTYTIGVTLFCSENLKGADLVVLLRRRGYAQLFERAISLLKEIQLPNNEAKRFYFKFNSEIYDEAFLRFGNEGRTDDNESVLYVADVDVYEGTIERPWQAAEDEAGKKLEAKMAEYSQTIDGELKKLTSQIDDTIKKTDVNITPGQITFGAGKTINGKTISSLFVQDPESIALISRLIKVKGDMIVDGSILGRHLKTGTLETGHFKAGSVTSEILAANAVTADKVQVDYALISKLIANQAFIRELTSQRAFITQINSIDFSAERMQGGRLLSINKATDFNLNDGSINLYSNTGVIRRIDDTTSSEFIKLNQGGFIGERVRDSKAARIIIGTNHDKTENTENETFAGTRLWSGKSGAENESLYEVVSDRIIFYSNGRYRSPWIIHNNTRDGSSYLIPGNEKGVRHNLGRGDKHFSGAWIDNIFIGKNAYNVGTYLWDLLTCLGQISKYGWDLKNQNIRSHITGVLNKYSFK
Physico‐chemical
properties
protein length:1292 AA
molecular weight: 145359,02610 Da
isoelectric point:6,32791
aromaticity:0,09288
hydropathy:-0,47748

Domains

Domains [InterPro]
DC_1274
ATT
7–578
DC_1274 DC_2006
IPR007119
Unmapped
18–318
IPR007119 Coil Coil IPR012892 DC_1717
IPR010572
ENZ
143–325
IPR010572
QBX25167.1
1 1292
Architecture
ATT
STR
RBD
ATT 7-578 | STR 700-1209 | RBD 1210-1292
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan242
[NCBI] 		2548066 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus gordonii
[NCBI] 		1302 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX25167.1 [NCBI]
Genbank nucleotide accession
MK448882 [NCBI]
CDS location
range 24703 -> 28581
strand +
CDS
TTGATTTATTTAAAAGAGGGGAATATCCCTCTTAATTTTTGTTTTGAAGATGACATCACTCAAGAAGCAAACAATACTTATCAATTGTCCTTTAAATTCCCTGTTAGTGACGATAAATGGGTTTTGTTAAAGAACGAAGTGCATTTGCTTGCTGATGATTTATTTGGAGAGCAAGAGTTTGTCATCATTGATGTTCAAAAGGGGCATGGATATATCACTGTATATGCAAATCAAGTAGCAACTTTGCTAAATGGGCAAAGCGTCCGTAAGATTGATGTGGATCGAGCTAACGGAATGACAGTGATGAATAAGCTGGTAGAAGGACTAAAAAGAGAATGTCCTTTTACCTTTTTCTCAGACATCCAGGACAAGCACACTCTCAGACTCGACAATGTATCGGTAATTGATGCGCTCACAAAAGGTCAACATTCGATTATTGGTCAATGGGGCGGTGATTTAGTCCGTGATAAATATTCGGTTAGGCTGCTGAAAAATGGAGGGATTGAAAATCAATCTCTTTTTATGTACAAGAAGAATCTATCTGAATACAAAGAATCGACCACTACAAAATCTCTTAAAACAAGAATCCACTTCCGCAAGGTCATTACTGCATCTGGTGAGGGTGAGAAAGAGAAAATCCTTGAAGTCACCGTGGACAGTCCACTGGTAGATAAGTACAAACATATCTATGAGTATGATATGGAAGTCCAAGATCAGGATGTTAAAACTCTTGATGATTTGAAAGAATATGGTAAGAAATACTTTCAATCAAGTCTGTGTGACCTGCCTGAAGAGAATCTAGAGATTAATGTTATCGGTCAAGCTGACCAGCCTGTTAAACTTTTTGATACAGTATCAATTTATTATGAGCTATACGATGTGGATATTCGAAAGAAAATCACAAAGTATAGTTATAGTCCGATGGCCAAGAAGTTAAAGAAAATTAGTTTTGGCAAAATTTCTCGATCGCTAGGTGGAGCTATTGGCCAAATCATTGATGATTCAGTGAAGGACAAAATTGCTAGTCATGATGCTGCTTACGATGCAAAGGTCCAGCAACTTATCGATAATGCTAATGCTGAGTACGATAAGAAAGCTAAGAGTCTAGAGCAGGACATCACTGACGGAATCGAGCAGGCCAAAGCTAAAGCAGAAGTAGTTAAGGAAGAGATCAATGCTGAAATCTCTGAGAAAATAAAAGCTGCTAACAAGGCCAATAAAGATGAAATTGTAGAAGAGTTTAAAGCTAAATACAATGGCATCGAGGTTAAGGTAGAGGATCTTAAGGCTACTGCTAACGGGCTGTCAGAAATGAACACTGCAATCCAACAAGAAATGGATAACTTTAAAACCTCGACTGCAAGCAAGTTTGCTGGCATTTCAGGCGCACAATCCCATTATGAGCAAAGTACCAATAAGGCCATTTCTGACCTTGTTAAGGTAACACAAAATAAAGCTGACCGTTCTTATGTAGAGCAGACGGCCCATGGGATTAAAGAGACAATCTCAAATATCAAAATCGGTAGACGAAATTTGATAAAAGGGACTCGTCTATTCCCAGGGGTTAGGGGAGTAGTCGGTGAATTTAATGGTTTTAAAGTAATTCGGTCCGAGATCACGAAAGAAAATCAAAAGGTTGTTGACCCGTTCGTGACGAATACAACTGTACCAATGATCGGAACCGAATATACAGCTGTGTTTTGGGCCAGGGCTTCTCGCAATGACTATAGATGCGTACTGCATCTATTTAGTCCTAACAGTGTTACAAAAGTAGTTACTAGTACAGGATTTGTTGCAGACAACTTGATCGATGGATATGCCATATTTACTATAACGACTGAATGGAGGCCATATTGGGTAAAATGGACCCAAACGCCTGTGAGTGTACCGAAACGTGTTATTTTTGGCCGACACGGGGCCAATTATGGTCAGAAGAAAGGTGACTGGCTTGAAATATGCGCCCCCGCCGTTTTCGAAGGGAATATGCCTGGCGACTGGAACGAAGCACCCGAAGATGCAACGAGTACGTTCCAAGCCGAGTTTGAAAAAACTGCTAGAGGTTTAGAGACTAAAATAACATCTTTTGAATCTTATGTGCAGGCAGATGGGGCACGTCAGGAAACTCTCAAGAAATACATCGAGGATAAGACAGCATCTAGCTTGAGCGCATTTAGAGAAAATATAGAATCTGGCTATATATCAAAATCCAAATATGAAGAAGATTCTCGTGGGATTACTCGAAAGTTTGAAGAGTTAAAAACTGGTGGACAAAATCTTGTCTTGAACAGTGGTGATCCTCAAAATATGAATAATTGGGGTGAAATCTCTCCTGATTCAGCCCCAACAGCGCAAATAGTGACGAATTCTTTATACTTTAATGAAACACGTAAGCTGATAGCTTTAAACAATAGGAACAGTACGCTTCAGGAATTCCTTTCTTCTCGTCGCTTTAATGTTAGGCAGAACACTACTTATACAATTGGAGTCACACTTTTTTGTTCAGAGAATTTAAAAGGTGCTGATTTAGTAGTATTACTTAGAAGAAGAGGATATGCTCAACTATTTGAGAGGGCTATTTCATTACTTAAAGAAATACAGTTGCCGAATAATGAAGCTAAAAGGTTTTATTTTAAGTTCAATTCTGAAATTTATGACGAAGCCTTTTTGAGATTTGGCAATGAAGGTAGGACTGACGATAATGAATCTGTGCTATATGTTGCTGATGTGGATGTATACGAGGGAACGATTGAGCGACCTTGGCAGGCTGCTGAAGACGAAGCAGGCAAAAAGCTGGAAGCAAAAATGGCAGAATATAGCCAGACTATAGATGGTGAATTGAAGAAATTGACAAGTCAAATTGATGACACTATCAAGAAGACTGATGTAAACATCACACCAGGTCAAATTACTTTCGGCGCAGGAAAGACCATCAATGGTAAGACAATTAGCTCCTTGTTTGTACAGGATCCTGAATCAATTGCCTTGATTTCAAGACTCATCAAAGTGAAAGGGGATATGATCGTTGATGGGTCCATTTTAGGACGTCATCTTAAAACGGGCACGCTGGAGACGGGTCACTTTAAGGCTGGCTCAGTAACCAGTGAAATTTTGGCAGCTAACGCTGTTACTGCTGATAAGGTTCAGGTTGACTATGCCTTGATCAGTAAATTAATTGCTAACCAGGCATTTATCCGTGAGTTGACTTCTCAGAGAGCATTTATTACTCAGATTAACTCGATTGATTTCAGTGCTGAGCGTATGCAGGGTGGTCGGTTGCTTTCAATTAATAAAGCGACTGACTTTAATCTAAATGATGGAAGCATTAATTTATATTCGAATACAGGAGTCATCAGGCGGATTGATGACACTACATCATCAGAATTTATCAAGTTGAATCAGGGCGGATTTATCGGTGAGCGGGTGAGGGATTCGAAGGCTGCCCGAATCATAATTGGTACTAACCATGACAAAACGGAGAATACTGAGAATGAGACATTCGCTGGAACTCGTCTCTGGTCTGGTAAGAGTGGGGCAGAAAATGAATCGCTCTATGAAGTCGTATCAGACCGTATCATCTTCTACTCAAACGGACGTTATCGTAGCCCGTGGATTATCCACAATAATACGCGAGATGGAAGCTCTTATCTGATTCCAGGGAACGAAAAGGGCGTACGGCACAATTTGGGGCGTGGTGACAAGCATTTTTCAGGAGCTTGGATAGATAACATTTTTATAGGTAAAAACGCTTATAACGTTGGTACTTATTTATGGGATCTATTGACATGCCTTGGTCAAATTTCCAAATATGGCTGGGATCTGAAAAACCAGAACATCAGAAGTCACATAACGGGCGTACTTAACAAGTACAGCTTTAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ecf8e30d0c50351fc70ec364853a21a9eb4e945e33384fbe8454eeedd8eaf522
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7742
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank