Protein

View in Explore
Genbank accession
URQ08737.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTQPLFPLGLETSESSNIKGFNNSGTIEHSPGAVMTFPEDTEVTGLPSSVRYNPDSDEFEGYYENGGWLSLGGVGIRWETLPYAPSSNLLEGRGYLINNTTGTSTVVLPSPTRIGDSVTICDAYGKFATYPLTVSPSGNNLYGSTEDMAITTDNVSATFTWSGPEQGWVITSGVGLGQGRVYSREIFTQILASETSAVTLNTPPTIVDVYADGKRLAESKYSLDGNLITFSPSLPASTELQVIEYTPIQLGNGGGSSSSTITWVYNGGSAIGGETEITLDVVVDDVPAIDINGSRQYKNLGFTFDPLTSKITLAQELDTEDEVVVIINGTPNIYNQIDYTLREVARVTNVKDTEVVYFSVGAVLSGYKVIYDKVTQRSYFIPELPTGTTAVSLSSSAVLVHSAGSVDLGALAVSREEYVTLAGTFDSGAVINTKNELLTHTDGKYRWDGTLPKTVDAGSTPTSTGGVGLGAWVSVGDASLRSDLNSTNGAGIVKTGNGNTVQETFDFIKNVQQTNLHPFVPSGNFGSGLPFDSSLQVFKYNDEYYSYKGPIAPGSIVPATPSVDSNWKKEPISDYIENYGGGVHVADQTPAIMAAISAGVRRIIFPKGELRMSQCDIPEYTQGLTFEGQGANQAYTGTTVIKPLNDNQNCLFNSGVNQHGQDSIKFKNIQFDGEWRCNHAILHESGAGWYYEKLTGKNFNTWVIYDDQGLTVIRDVYTEATSSDLTKRATGGCIRIYSDSVMDTVNCYGGSVPLLLAAGGNRITNIWANGGYDVGAIRLMPKNDSTNHINTAMSNIYIGESTNTSATAIPVLHIQGNSIRRVSGVQISNAHFVHADLTLNTNMVMIRTDKVDGFVMSSFDVLGRGEYSSASSRTYNFLNATDSTGMAFSAGSVRGINNNPIVLSSGSRLAIDAVEFDGWSTNSDSGIENKAAIRSYGAGTRCCIGSTCAFNASQADAYAVYAGDEFAVDISILNLNYPSSNIISPANANYSYMYKRPGGKLTLVNTLTI
Physico‐chemical
properties
protein length:1013 AA
molecular weight: 108415,08530 Da
isoelectric point:4,73556
aromaticity:0,09181
hydropathy:-0,18095

Domains

Domains [InterPro]
DC_1946
ATT
1–690
DC_1946
G3DSA:3.30.2020.50
ATT
335–420
G3DSA:3.30.2020.50 G3DSA:2.10.10.80
IPR040775
RBD
416–481
IPR040775
URQ08737.1
1 1013
Architecture
ATT
ATT 1-690 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URQ08737.1
1 1013
Domain Start End Length (AA) Confidence
N-terminal 1 593 593 0,9961
Central domain 594 989 397 0,9888
C-terminal 990 1013 23 0,6309
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-593
Central
594-989
C-terminal
990-1013

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage BRM 13312
[NCBI] 		2654654 No lineage information
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URQ08737.1 [NCBI]
Genbank nucleotide accession
ON169961 [NCBI]
CDS location
range 81262 -> 84303
strand +
CDS
ATGGCCAACAAACCAACACAGCCTCTTTTCCCTTTGGGTTTAGAAACTTCTGAGTCTTCGAACATAAAAGGCTTCAACAACTCCGGCACTATTGAGCATTCCCCTGGTGCCGTAATGACATTTCCTGAAGATACTGAAGTTACAGGTCTTCCATCTTCTGTGCGTTACAATCCTGATAGTGATGAATTTGAAGGTTATTACGAAAACGGTGGTTGGTTGTCTTTGGGGGGCGTTGGAATACGCTGGGAAACGCTCCCTTACGCTCCCTCTAGCAATTTGTTAGAAGGTCGTGGCTATCTCATTAATAATACAACAGGGACATCTACAGTGGTTCTCCCTTCCCCTACGCGTATTGGGGATTCCGTTACTATTTGTGATGCTTATGGGAAATTTGCCACTTACCCATTGACCGTGTCTCCTTCTGGAAATAATTTGTATGGCTCCACTGAAGACATGGCTATAACAACTGATAACGTATCAGCAACGTTTACTTGGTCTGGACCTGAACAAGGTTGGGTTATTACATCCGGCGTCGGTCTTGGCCAAGGCCGTGTCTACAGTCGTGAAATCTTTACACAAATTTTGGCGTCTGAAACAAGTGCTGTCACTCTCAATACTCCACCAACAATCGTGGACGTGTATGCTGACGGAAAACGTCTTGCGGAATCCAAATATTCACTAGATGGGAATTTAATCACTTTCAGTCCTTCTTTGCCAGCCAGCACAGAACTTCAGGTGATTGAATATACTCCTATTCAATTGGGTAATGGCGGTGGTTCTAGTTCTTCTACGATTACTTGGGTCTATAATGGGGGTTCAGCGATTGGCGGTGAAACCGAAATCACGTTGGACGTCGTTGTTGATGATGTTCCGGCCATTGATATAAACGGAAGTCGCCAGTATAAAAATCTGGGGTTCACATTCGATCCATTAACCAGTAAAATCACTCTTGCGCAAGAACTGGATACAGAGGATGAAGTTGTTGTAATTATCAATGGAACGCCAAACATCTATAATCAAATTGATTATACTTTGCGGGAAGTGGCTCGTGTAACCAATGTTAAAGATACAGAGGTCGTTTATTTTAGTGTTGGTGCTGTGTTAAGCGGGTATAAAGTTATCTATGATAAAGTAACACAGAGATCATATTTTATTCCAGAGTTACCGACTGGAACCACGGCAGTCAGCCTTAGTTCTTCGGCTGTGCTTGTACATTCTGCTGGTAGTGTTGATCTGGGCGCATTAGCTGTATCTCGTGAAGAATATGTTACCTTGGCTGGGACATTTGATTCTGGTGCTGTCATCAATACTAAAAATGAATTACTCACCCATACTGATGGAAAGTATCGTTGGGATGGCACACTTCCTAAAACTGTCGATGCTGGATCAACACCTACATCAACGGGTGGTGTTGGTTTAGGTGCATGGGTAAGTGTTGGTGATGCTTCTTTAAGATCTGATTTGAATTCGACAAATGGAGCTGGAATTGTAAAAACTGGAAATGGGAATACTGTACAAGAAACATTTGATTTTATAAAAAATGTTCAACAAACAAATCTACATCCTTTTGTTCCTTCAGGCAATTTCGGTTCTGGGCTTCCTTTTGATTCTTCGTTACAGGTATTCAAGTATAATGATGAATATTACTCATACAAAGGACCTATTGCCCCAGGTTCGATAGTTCCGGCAACCCCATCCGTTGACTCAAACTGGAAAAAAGAACCTATTTCTGATTACATAGAAAATTACGGTGGTGGTGTGCATGTAGCTGATCAGACACCTGCAATTATGGCGGCTATATCTGCTGGTGTTCGCCGTATCATATTTCCTAAAGGTGAACTTAGAATGTCTCAGTGTGATATCCCAGAGTACACACAAGGCCTCACGTTTGAAGGGCAAGGTGCCAATCAGGCGTACACTGGAACAACAGTGATCAAACCGTTAAATGATAATCAAAATTGTTTATTTAATTCTGGCGTAAACCAGCACGGACAGGATTCTATAAAATTTAAAAATATTCAATTTGACGGAGAATGGCGTTGCAACCATGCAATATTGCATGAGTCCGGTGCTGGTTGGTACTATGAAAAACTTACAGGTAAAAATTTCAATACATGGGTTATCTACGATGATCAGGGTTTGACCGTAATACGTGATGTTTATACTGAAGCAACCAGTTCAGATCTAACGAAAAGAGCTACAGGTGGATGTATCCGTATATACTCAGATTCTGTAATGGACACCGTAAACTGTTATGGTGGAAGTGTTCCGCTATTGCTCGCTGCTGGTGGAAACCGAATTACGAATATCTGGGCAAATGGTGGGTATGATGTTGGCGCAATAAGGTTGATGCCAAAAAATGACAGTACTAACCATATCAATACCGCTATGAGCAATATCTATATCGGAGAAAGCACAAATACATCTGCAACTGCAATTCCAGTTCTTCACATACAAGGTAACTCAATTCGTCGCGTATCTGGTGTTCAGATTTCAAATGCACATTTTGTGCATGCTGACTTGACTCTCAATACAAACATGGTGATGATACGAACCGATAAAGTTGATGGTTTTGTGATGTCATCTTTTGATGTTCTTGGACGAGGCGAGTACAGTTCTGCAAGCAGTCGCACATATAATTTCTTAAATGCGACAGATTCTACCGGAATGGCTTTTTCTGCCGGAAGTGTAAGAGGTATTAATAATAACCCAATAGTTTTATCATCAGGGTCTAGGTTAGCTATTGATGCCGTTGAATTCGATGGGTGGAGTACGAACTCTGATTCAGGTATAGAGAATAAAGCTGCTATACGTTCATATGGTGCTGGAACAAGATGCTGCATTGGTAGCACATGTGCTTTCAATGCTTCGCAAGCAGATGCTTACGCTGTGTATGCAGGGGATGAATTTGCCGTTGATATTTCTATTCTTAATCTCAACTACCCTAGTAGCAATATAATCAGTCCTGCAAATGCAAATTACAGTTACATGTATAAGCGACCAGGTGGAAAATTAACCTTAGTCAACACATTGACAATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
96e1fd75fd5a8247e427b1ce882b9073b9970de3adb3bbf2c2cbad2aa1b945b3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7250
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization, comparative genomic analysis and efficiency of wild-type bacteriophages on the reduction of Salmonella Heidelberg colonization in broiler chickens Vaz,C.S.L., da Fonseca,F.N., Voss-Rech,D., Mores,M.A.Z., Coldebella,A. and Cantao,M.E. 2024-05 — GenBank