Protein

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Genbank accession
UYL05433.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,76
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MSLTNLNSSNSKSMLINSGTFRSGVYITSQNQILTYTDSNGMTAGYYYTGSVPYTTTKNTPQSDSALWKVMFIADKYSYLKSDIVPITSGGTGANNISNARTNFGLGTADTPTFQSLNIQYSSNEPKINLNNSIIRSNTSNALVVSALQGIYLRPAGDNVSSPQISYSTAGALTMTNTNVTVNGNVSVNGSLTLSTALALSSGGTGATDAPTARTNLGLGTSSTVDTGTSGATIPLLSTANTWSSTQTIQGNLVVGVSGTSTINLGASAFMRDNGSKALIITSNSASDASPAGLYLRPMGDTVSTVQIYGNSTGWSVNGNTQISGTFSNTGNASFLNSAYTVDSTGMYASSTGKVLGAVGTPWSTTYTNTLTSGTSAQLYLNSTSGTINLQNSGVTTYTYTSSAFSPATTGKNSAAAGTPWSITYSNSITSGTSTALTLNGTSTNINLQIAGTTIIQLGSSGFVSNNNVTYRSKNTSGTALDLCKIDTSNITQIGNTTIQTNINSSVHPTVNVAGTSYTLYSTGNKPTVSAFRASYLTTAGSDSKQTLTASNTPQTLLVNTITAASSIITANTSTGTFLSNVTQGMMMSINAQIIRETSGGGDVYWIMFLETSTDGTTWTSVPGSNRIVTLSSNTTNEMKQVDFTVAIQSTQGSYIRIRHACTDSTKTVSVISKDSLFAGVPISSGLIVSFLTI
Physico‐chemical
properties
protein length:694 AA
molecular weight: 71817,44660 Da
isoelectric point:8,90368
aromaticity:0,06916
hydropathy:-0,08199

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
15–85
G3DSA:2.10.10.80 DC_1396
DC_1396
ATT
20–185
DC_1396 DC_1142
UYL05433.1
1 694
Architecture
ATT
STR
ATT 15-421 | STR 422-575 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYL05433.1
1 694
Domain Start End Length (AA) Confidence
N-terminal 1 112 112 0,9865
Central domain 113 311 200 0,3946
C-terminal 312 694 382 0,8675
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-112
Central
113-311
C-terminal
312-694

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage KP13-7
[NCBI] 		2985662 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYL05433.1 [NCBI]
Genbank nucleotide accession
OP617745.1 [NCBI]
CDS location
range 252921 -> 255005
strand +
CDS
ATGTCATTAACTAACTTAAATTCATCAAACTCAAAAAGTATGTTAATTAATTCTGGTACATTTAGAAGTGGGGTGTACATCACCTCACAAAACCAAATTTTAACATATACAGATAGTAATGGGATGACTGCTGGATATTATTACACTGGCTCAGTTCCATATACTACCACCAAAAATACACCACAGAGTGATAGTGCACTTTGGAAAGTTATGTTCATTGCAGATAAGTACTCTTATCTAAAATCTGACATTGTACCAATTACCAGTGGTGGTACTGGAGCTAATAATATATCTAATGCAAGAACTAACTTTGGTTTAGGCACTGCTGATACCCCAACGTTCCAGAGTCTTAATATTCAGTACAGTTCCAATGAACCAAAAATTAATTTAAATAATTCCATCATTAGATCTAACACCAGTAACGCATTAGTTGTTAGTGCATTACAAGGGATTTATTTACGTCCAGCAGGTGACAATGTTTCGAGTCCACAAATTTCATATTCTACGGCTGGGGCATTGACAATGACAAACACTAATGTTACAGTTAACGGTAATGTTAGTGTTAACGGTAGTTTAACATTAAGTACTGCATTAGCACTTTCAAGTGGTGGTACTGGAGCAACTGATGCACCCACGGCGAGAACAAATTTAGGATTAGGTACATCATCAACTGTTGATACTGGTACAAGTGGTGCCACAATTCCATTGCTAAGTACTGCAAATACATGGTCATCTACTCAAACTATACAAGGCAACTTAGTTGTTGGTGTATCAGGTACGAGTACTATTAATTTGGGTGCTTCTGCTTTTATGCGAGATAATGGATCAAAAGCATTAATTATCACGTCCAACTCAGCATCTGATGCATCCCCTGCTGGTCTGTATCTACGACCAATGGGTGATACTGTAAGTACAGTGCAAATTTATGGTAATAGTACTGGATGGTCAGTCAATGGTAATACTCAAATTTCTGGAACATTTTCTAATACAGGAAATGCTTCATTTTTGAATAGTGCTTATACAGTTGATAGTACTGGGATGTACGCATCAAGTACTGGAAAAGTGTTAGGTGCCGTTGGCACACCGTGGAGTACTACTTATACTAATACATTAACATCTGGTACATCAGCACAGCTTTATTTAAATTCAACATCTGGTACTATAAATTTACAAAATTCTGGTGTAACCACATATACATACACATCTAGTGCTTTTAGTCCAGCAACAACAGGTAAAAACTCGGCGGCGGCTGGAACTCCGTGGAGTATAACATATAGCAATTCTATTACATCAGGAACCAGTACGGCATTAACTTTAAATGGCACTTCAACTAACATAAATTTACAAATAGCTGGAACTACGATAATACAGCTAGGATCGTCGGGTTTTGTATCTAATAACAACGTGACATATAGATCGAAAAATACATCAGGTACTGCATTAGATCTATGCAAAATTGATACTAGTAATATTACACAAATTGGTAATACTACTATACAAACTAATATAAATTCTTCAGTACATCCAACAGTAAACGTGGCTGGAACTTCTTATACACTTTATAGTACTGGTAATAAACCAACAGTAAGTGCATTTAGAGCAAGCTATTTAACAACTGCTGGTTCAGATTCCAAACAAACATTAACTGCATCTAATACACCACAGACTTTATTAGTTAATACTATAACTGCTGCATCAAGTATTATAACTGCTAATACAAGTACTGGTACATTTTTATCTAATGTTACACAAGGCATGATGATGTCAATTAACGCACAAATTATTAGAGAAACTTCTGGTGGTGGTGATGTTTATTGGATAATGTTCTTGGAAACAAGTACGGATGGTACAACATGGACTTCTGTTCCGGGTTCTAATAGAATTGTTACATTAAGTTCTAACACAACTAATGAAATGAAGCAGGTTGATTTTACCGTTGCTATACAAAGTACACAAGGTTCATATATAAGAATTAGACATGCCTGTACTGATAGTACTAAAACCGTTTCTGTAATTTCTAAAGATTCATTATTTGCCGGTGTTCCAATTTCATCTGGTTTGATAGTAAGTTTCTTAACTATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8af2d540a6b9696e8ea74488737f3953531abc8ab4bb220ecce61702a42e223c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6022
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage therapy against pathological Klebsiella pneumoniae that determine the clinical course of primary sclerosing cholangitis Ichikawa,M., Nakamoto,N., Kredo-Russo,S., Weinstock,E., Weiner,I.N., Khabra,E., Ben-Ishay,N., Inbar,D., Kowalsman,N., Mordoch,R., Nicenboim,J., Golembo,M., Zak,N.B., Suzuki,T., Miyamoto,K., Teratani,T., Fujimori,S., Aoto,Y., Konda,M., Hayashi,N., Chu,P.-S., Taniki,N., Morikawa,R., Kasuga,R., Tabuchi,T., Sugimoto,S., Mikami,Y., Shiota,A., Bassan,M. and Kanai,T. 2023-06 — GenBank